Rn00821111_gH Best Coverage

• Gene Symbol: Ptbp1
• Gene Name: polypyrimidine tract binding protein 1
• Gene Aliases: Ptb, Pybp, Pybp1, Pybp2
• Chromosome Location: Chr.7: 12663965 - 12673723 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Ptbp1
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001271057.1	NP_001257986.1	6 - 7	784		60
	NM_022516.5	NP_071961.2	6 - 7	784		60
GenBank mRNA	BC061858.1	-	6 - 7	779	5598495	60
	CK365398.1	-	3 - 4	370		60
	X60789.1	-	6 - 7	747		60
	X60790.1	-	2 - 3	158		60
	X74565.1	-	6 - 7	765		60

More Information

Additional Information:

Based on assay re-evaluation, this assay may detect genomic DNA. Please contact Tech Support if you need more information.

• Set Membership: Ambion siRNA available, Amplicon length less than or equal to 70, Mammalian Gene Collection, Detect Genomic DNA, Recommended Assay, Rattus norvegicus, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Ptbp1

Gene Ontology Categories:

Process(es)

regulation of alternative mRNA splicing, via spliceosome
mRNA processing
RNA splicing
negative regulation of RNA splicing
positive regulation of transcription from RNA polymerase II promoter
negative regulation of mRNA splicing, via spliceosome
negative regulation of muscle cell differentiation
nucleic acid phosphodiester bond hydrolysis

Function(s)

nucleotide binding
single-stranded DNA binding
RNA binding
endonuclease activity
pre-mRNA binding
poly(A) RNA binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Clariom S Assay	PSR0700017522.rn.1	TC0700002193.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0700017521.rn.1	TC0700002193.rn.1	RTA TC