Rn01452670_m1 Best Coverage

• Gene Symbol: Arid3a
• Gene Name: AT rich interactive domain 3A (Bright like)
• Gene Aliases: -
• Chromosome Location: Chr.7: 12575989 - 12602415 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Arid3a
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001108066.2	NP_001101536.2	6 - 7	1520		68
	XM_006240902.2	XP_006240964.1	6 - 7	1835		68
	XM_006240903.1	XP_006240965.1	6 - 7	1653		68
	XM_006240904.2	XP_006240966.1	6 - 7	1655		68
	XM_006240905.2	XP_006240967.1	6 - 7	2018		68
	XM_008765169.1	XP_008763391.1	6 - 7	1526		68
GenBank mRNA	BC168846.1	-	6 - 7	1520	7114467	68

More Information

Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC0700002184.rn.1

• Set Membership: Amplicon length less than or equal to 70, Mammalian Gene Collection, Recommended Assay, Rattus norvegicus, Probe spans exons

Panther Classification:

Molecular Function -

DNA-binding transcription factor

Gene Ontology Categories:

Process(es)

regulation of transcription, DNA-templated
transcription from RNA polymerase II promoter
positive regulation of transcription from RNA polymerase II promoter

Function(s)

RNA polymerase II regulatory region sequence-specific DNA binding
transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding
DNA binding
chromatin binding
transcription factor activity, sequence-specific DNA binding
protein homodimerization activity

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Clariom S Assay	PSR0700017446.rn.1	TC0700002184.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0700017447.rn.1	TC0700002184.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0700017441.rn.1	TC0700002184.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0700017444.rn.1	TC0700002184.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0700017450.rn.1	TC0700002184.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0700017442.rn.1	TC0700002184.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0700017448.rn.1	TC0700002184.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0700017443.rn.1	TC0700002184.rn.1	RTA TC