Rn01476362_g1

• Gene Symbol: Apoe
• Gene Name: apolipoprotein E
• Gene Aliases: APOEA
• Chromosome Location: Chr.1: 80612894 - 80616820 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Apoe
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001270681.1	NP_001257610.1	2 - 3	181		224
	NM_001270682.1	NP_001257611.1	2 - 3	160		224
	NM_001270683.1	NP_001257612.1	2 - 3	147		224
	NM_001270684.1	NP_001257613.1	2 - 3	123		224
	NM_138828.3	NP_620183.2	2 - 3	141		224
GenBank mRNA	BC060313.1	-	2 - 3	114	6919048	224
	BC086581.1	-	2 - 3	84	7307758	224
	FQ209426.1	-	2 - 3	112		224
	FQ209428.1	-	2 - 3	110		224
	FQ209457.1	-	2 - 3	109		224
	FQ209625.1	-	2 - 3	110		224
	FQ209879.1	-	1 - 2	57		224
	FQ210262.1	-	2 - 3	110		224
	FQ210410.1	-	2 - 3	110		224
	FQ211250.1	-	2 - 3	111		224
	FQ212769.1	-	2 - 3			224
	FQ213060.1	-	2 - 3	106		224
	FQ213396.1	-	2 - 3	106		224
	FQ213533.1	-	2 - 3	113		224
	FQ213898.1	-	2 - 3	102		224
	FQ214072.1	-	2 - 3	110		224
	FQ214282.1	-	2 - 3	110		224
	FQ218386.1	-	2 - 3	109		224
	FQ218473.1	-	2 - 3	139		224
	FQ218485.1	-	2 - 3	110		224
	FQ218540.1	-	2 - 3	110		224
	FQ218699.1	-	2 - 3	112		224
	FQ218898.1	-	2 - 3	112		224
	FQ218953.1	-	1 - 2	166		224
	FQ219009.1	-	2 - 3	110		224
	FQ219124.1	-	1 - 2	70		224
	FQ219144.1	-	2 - 3	110		224
	FQ219319.1	-	2 - 3	110		224
	FQ219432.1	-	2 - 3	110		224
	FQ219448.1	-	2 - 3	112		224
	FQ219475.1	-	2 - 3	105		224
	FQ219490.1	-	2 - 3	110		224
	FQ219516.1	-	2 - 3	110		224
	FQ219534.1	-	2 - 3	110		224
	FQ219700.1	-	2 - 3	110		224
	FQ219711.1	-	2 - 3	110		224
	FQ220125.1	-	2 - 3	106		224
	FQ220532.1	-	2 - 3	106		224
	FQ220683.1	-	2 - 3	110		224
	FQ220752.1	-	2 - 3	141		224
	FQ220879.1	-	2 - 3	114		224
	FQ221856.1	-	2 - 3	110		224
	FQ223299.1	-	1 - 2	61		224
	FQ229186.1	-	2 - 3	110		224
	FQ229201.1	-	2 - 3	110		224
	FQ229530.1	-	1 - 2	61		224
	FQ229565.1	-	2 - 3	106		224
	FQ229650.1	-	2 - 3	110		224
	FQ229759.1	-	2 - 3	110		224
	FQ229950.1	-	2 - 3	110		224
	FQ230084.1	-	2 - 3	110		224
	FQ231375.1	-	2 - 3	139		224
	J00705.1	-	1 - 2	68		224

More Information

• Set Membership: Ambion siRNA available, Amplicon length greater than or equal to 101, Mammalian Gene Collection, Detect Genomic DNA, Rattus norvegicus, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Apoe

Panther Classification:

Molecular Function -

apolipoprotein

Gene Ontology Categories:

Process(es)

negative regulation of endothelial cell proliferation
response to dietary excess
lipid metabolic process
triglyceride metabolic process
cholesterol biosynthetic process
cholesterol catabolic process
lipid transport
cellular calcium ion homeostasis
receptor-mediated endocytosis
response to oxidative stress
G-protein coupled receptor signaling pathway
nitric oxide mediated signal transduction
aging
protein localization
cholesterol metabolic process
regulation of gene expression
negative regulation of platelet activation
positive regulation of cholesterol esterification
positive regulation of cholesterol efflux
peripheral nervous system axon regeneration
long-chain fatty acid transport
protein import
triglyceride catabolic process
cGMP-mediated signaling
negative regulation of blood coagulation
positive regulation of cGMP biosynthetic process
neuron projection regeneration
axon regeneration
regulation of cholesterol transport
regulation of Cdc42 protein signal transduction
response to retinoic acid
positive regulation of low-density lipoprotein particle receptor catabolic process
response to insulin
cholesterol efflux
phospholipid efflux
very-low-density lipoprotein particle remodeling
low-density lipoprotein particle remodeling
high-density lipoprotein particle remodeling
high-density lipoprotein particle assembly
chylomicron remnant clearance
high-density lipoprotein particle clearance
very-low-density lipoprotein particle clearance
lipoprotein metabolic process
lipoprotein biosynthetic process
lipoprotein catabolic process
vasodilation
cholesterol homeostasis
positive regulation of catalytic activity
negative regulation of MAP kinase activity
negative regulation of neuron apoptotic process
negative regulation of blood vessel endothelial cell migration
reverse cholesterol transport
response to ethanol
negative regulation of cholesterol biosynthetic process
positive regulation of axon extension
positive regulation of lipid biosynthetic process
oligodendrocyte differentiation
artery morphogenesis
negative regulation of inflammatory response
positive regulation of nitric-oxide synthase activity
positive regulation of membrane protein ectodomain proteolysis
negative regulation of lipid biosynthetic process
maintenance of location in cell
lipid homeostasis
fatty acid homeostasis
positive regulation of dendritic spine development
negative regulation of dendritic spine development
cellular response to interleukin-1
cellular response to growth factor stimulus
cellular response to cholesterol
cardiovascular system development
negative regulation of cholesterol efflux
AMPA glutamate receptor clustering
NMDA glutamate receptor clustering
regulation of beta-amyloid clearance
regulation of neuron death
negative regulation of neuron death
positive regulation of neuron death
negative regulation of postsynaptic membrane organization
positive regulation of postsynaptic membrane organization
negative regulation of presynaptic membrane organization
positive regulation of presynaptic membrane organization
positive regulation of beta-amyloid formation
negative regulation of beta-amyloid formation
regulation of tau-protein kinase activity
negative regulation of dendritic spine maintenance
positive regulation of dendritic spine maintenance
positive regulation of phospholipid efflux
positive regulation of neurofibrillary tangle assembly
negative regulation of phospholipid efflux
negative regulation of lipid transport across blood brain barrier
positive regulation of lipid transport across blood brain barrier

Function(s)

beta-amyloid binding
receptor binding
lipid transporter activity
phospholipid binding
heparin binding
lipid binding
cholesterol binding
antioxidant activity
cholesterol transporter activity
identical protein binding
protein homodimerization activity
hydroxyapatite binding
metal chelating activity
tau protein binding
low-density lipoprotein particle receptor binding
phosphatidylcholine-sterol O-acyltransferase activator activity
very-low-density lipoprotein particle receptor binding
lipoprotein particle binding