Rn01477085_g1

Gene Symbol:

Apoc1 LOC100911905

Gene Name:

apolipoprotein C-I

apolipoprotein C-I-like

Gene Aliases:

ALPCI, Apo-CIB, ApoC-IB, LRRG04

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Chromosome Location:

Chr.1: 80606638 - 80609921 on Build Rnor_6.0

Chromosome Location:

Chr.Un|NW_007906487: 10655 - 11514 on Build Rnor_6.0

Species:

Rat

Species Specific ID (Flybase ID):

-

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Assay Details

Gene Symbol: Apoc1
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001109996.1	NP_001103466.1	2 - 3	108		88
	NM_012824.2	NP_036956.1	1 - 2	143		88
GenBank mRNA	AY327505.1	-	2 - 3	125		88
	BC098670.1	-	1 - 2	82	7372566	88
	FQ210440.1	-	2 - 3	108		88
	FQ210757.1	-	2 - 3	97		88
	FQ211211.1	-	2 - 3	109		88
	FQ212377.1	-	2 - 3	108		88
	FQ223744.1	-	2 - 3	108		88
	X15512.1	-	1 - 2	143		88

Gene Symbol: LOC100911905
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	XM_003752245.2	XP_003752293.2	2 - 3	142		88

More Information

Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC0100004934.rn.1

• Set Membership: Ambion siRNA available, Amplicon length between 86 and 100, Transporter, 3' Most, Mammalian Gene Collection, Detect Genomic DNA, Rattus norvegicus, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Apoc1
Click here to find siRNAs for Gene LOC100911905

Panther Classification:

Molecular Function -

apolipoprotein

Gene Ontology Categories:

Process(es)

triglyceride metabolic process
lipid transport
cholesterol metabolic process
negative regulation of phosphatidylcholine catabolic process
negative regulation of very-low-density lipoprotein particle clearance
regulation of lipid transport
negative regulation of cholesterol transport
cholesterol efflux
phospholipid efflux
plasma lipoprotein particle remodeling
chylomicron remnant clearance
very-low-density lipoprotein particle clearance
lipoprotein metabolic process
negative regulation of fatty acid biosynthetic process
negative regulation of lipid metabolic process
negative regulation of receptor-mediated endocytosis
negative regulation of lipid catabolic process
negative regulation of lipoprotein lipase activity

Function(s)

molecular_function
phospholipase inhibitor activity
fatty acid binding
lipase inhibitor activity

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Clariom S Assay	PSR0100039014.rn.1	TC0100004934.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0100039012.rn.1	TC0100004934.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0100039011.rn.1	TC0100004934.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0100039015.rn.1	TC0100004934.rn.1	RTA TC