Rn01517114_m1 Best Coverage

• Gene Symbol: Sptlc2
• Gene Name: serine palmitoyltransferase, long chain base subunit 2
• Gene Aliases: Pomt2
• Chromosome Location: Chr.6: 111334408 - 111418008 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Sptlc2
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001037097.1	NP_001032174.1	8 - 9	1270		66
	XM_008764823.1	XP_008763045.1	8 - 9	1365		66
GenBank mRNA	BC107662.1	-	8 - 9	1270	7936642	66

More Information

Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC0600002912.rn.1

• Set Membership: Ambion siRNA available, Amplicon length less than or equal to 70, Mammalian Gene Collection, Recommended Assay, Rattus norvegicus, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Sptlc2

Panther Classification:

Molecular Function -

transaminase

Gene Ontology Categories:

Process(es)

sphingomyelin biosynthetic process
sphinganine biosynthetic process
sphingosine biosynthetic process
ceramide biosynthetic process

Function(s)

serine C-palmitoyltransferase activity
pyridoxal phosphate binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Clariom S Assay	PSR0600020685.rn.1	TC0600002912.rn.1	RTA TC