Rn01533872_m1

• Gene Symbol: Ngf
• Gene Name: nerve growth factor (beta polypeptide)
• Gene Aliases: Ngfb, beta-NGF
• Chromosome Location: Chr.2: 204886158 - 204939523 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Ngf
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001277055.1	NP_001263984.1	2 - 3	170		114
	XM_006233052.2	XP_006233114.1	2 - 3	266		114
	XM_006233053.2	XP_006233115.1	2 - 3	201		114
GenBank mRNA	FQ232560.1	-	2 - 3	170		114

More Information

Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC0200001865.rn.1

Additional Information:

This assay is in the 5'UTR region of the NM_001277055.1,XM_006233052.2,XM_006233053.2 transcripts.

• Set Membership: Amplicon length greater than or equal to 101, 3' Most, Rattus norvegicus, 1700, Inventoried, Probe spans exons

Panther Classification:

Molecular Function -

neurotrophic factor

Gene Ontology Categories:

Process(es)

inflammatory response
cell-cell signaling
peripheral nervous system development
aging
memory
circadian rhythm
positive regulation of cell proliferation
adult locomotory behavior
extrinsic apoptotic signaling pathway via death domain receptors
response to radiation
response to mechanical stimulus
response to organic substance
response to ozone
positive regulation of gene expression
negative regulation of endopeptidase activity
positive regulation of neuron projection development
positive regulation of neuron maturation
response to organic cyclic compound
sensory perception of pain
positive regulation of cell growth
neuron projection development
positive regulation of protein autophosphorylation
response to lipopolysaccharide
response to nicotine
intracellular signal transduction
nerve growth factor signaling pathway
response to drug
response to peptide hormone
negative regulation of neuron apoptotic process
regulation of neuron differentiation
positive regulation of neuron differentiation
positive regulation of axon extension
regulation of neurotransmitter secretion
positive regulation of collateral sprouting
neuron projection morphogenesis
positive regulation of sequence-specific DNA binding transcription factor activity
regulation of release of sequestered calcium ion into cytosol
response to glucocorticoid
positive regulation of neurotrophin TRK receptor signaling pathway
neuron apoptotic process
response to electrical stimulus
extrinsic apoptotic signaling pathway in absence of ligand
positive regulation of stem cell proliferation
negative regulation of type B pancreatic cell apoptotic process

Function(s)

molecular_function
receptor signaling protein activity
nerve growth factor receptor binding
growth factor activity
metalloendopeptidase inhibitor activity

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Agilent Whole Rat Genome Microarray 4x44K v2	A_64_P120699	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_64_P120699	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_64_P120699	-	-
Agilent SurePrint G3 Rat GE 8x60K Microarray	A_64_P120699	-	-
SurePrint G3 Rat Gene Expression Microarray G4131A	A_42_P461587	-	-

Array Name	Probe IDs	Targets	Target Type
Rat Genome 230 2.0 Array	1371259_PM_at	-	-
Rat Genome 230 2.0 Array	1371259_at	-	-
Rat Genome 230 2.0 Array	1380624_PM_at	-	-
Rat Genome 230 2.0 Array	1380624_at	-	-
Affymetrix HT Rat Focus Array	1371259_at	-	-
Affymetrix HT Rat Focus Array	1371259_PM_at	-	-
Affymetrix Rat Clariom S Assay	PSR0200012664.rn.1	TC0200001865.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0200012665.rn.1	TC0200001865.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0200012661.rn.1	TC0200001865.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0200012666.rn.1	TC0200001865.rn.1	RTA TC
Rat Expression Set 230	1371259_PM_at	-	-
Rat Expression Set 230	1371259_at	-	-
Rat Expression Set 230	1380624_PM_at	-	-
Rat Expression Set 230	1380624_at	-	-
Rat Genome U34 Set	rc_AI137043_at	-	-
Rat Genome U34 Set	rc_AI137043_at	-	-

Array Name	Probe IDs	Targets	Target Type
ABI Rat Genome Survey Microarray	22352828	-	-

Array Name	Probe IDs	Targets	Target Type
Illumina ratRef-12 v1.0 expression beadchip	ILMN_1362230	-	-
RatRef-12 Expression BeadChip	ILMN_59523	-	-