Rn04341446_g1 Best Coverage

• Gene Symbol: Rpsa
• Gene Name: ribosomal protein SA
• Gene Aliases: Lamr1
• Chromosome Location: Chr.8: 128806056 - 128809987 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Rpsa
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_017138.2	NP_058834.1	3 - 4	317		57
	XM_008766672.1	XP_008764894.1	3 - 4	390		57
GenBank mRNA	BC060578.1	-	3 - 4	335	6919235	57
	D25224.1	-	3 - 4	318		57
	FJ386454.1	-	2 - 3	298		57
	FQ209463.1	-	3 - 4	331		57
	FQ209469.1	-	3 - 4	331		57
	FQ209490.1	-	3 - 4	332		57
	FQ209667.1	-	3 - 4	331		57
	FQ209729.1	-	3 - 4	331		57
	FQ212660.1	-	3 - 4	331		57
	FQ212893.1	-	3 - 4	331		57
	FQ213275.1	-	3 - 4	331		57
	FQ213317.1	-	3 - 4	331		57
	FQ213334.1	-	3 - 4	331		57
	FQ213623.1	-	3 - 4	334		57
	FQ213835.1	-	3 - 4	332		57
	FQ213894.1	-	3 - 4	331		57
	FQ215242.1	-	3 - 4	331		57
	FQ215292.1	-	3 - 4	332		57
	FQ216085.1	-	3 - 4	331		57
	FQ216130.1	-	3 - 4	331		57
	FQ216245.1	-	3 - 4	331		57
	FQ216788.1	-	3 - 4	333		57
	FQ216997.1	-	3 - 4	331		57
	FQ217664.1	-	3 - 4	331		57
	FQ219586.1	-	3 - 4	331		57
	FQ219785.1	-	3 - 4	334		57
	FQ220012.1	-	3 - 4	331		57
	FQ220017.1	-	3 - 4	329		57
	FQ220075.1	-	3 - 4	332		57
	FQ220084.1	-	3 - 4	334		57
	FQ220134.1	-	3 - 4	331		57
	FQ220171.1	-	3 - 4	330		57
	FQ220184.1	-	3 - 4	331		57
	FQ220347.1	-	3 - 4	333		57
	FQ220461.1	-	3 - 4	312		57
	FQ220468.1	-	3 - 4	331		57
	FQ220661.1	-	3 - 4	334		57
	FQ220822.1	-	3 - 4	331		57
	FQ220904.1	-	3 - 4	332		57
	FQ221103.1	-	3 - 4	331		57
	FQ221334.1	-	3 - 4	351		57
	FQ221443.1	-	3 - 4	332		57
	FQ221672.1	-	3 - 4			57
	FQ222093.1	-	3 - 4	333		57
	FQ222280.1	-	3 - 4	331		57
	FQ222542.1	-	3 - 4	333		57
	FQ222757.1	-	3 - 4	329		57
	FQ224747.1	-	3 - 4	331		57
	FQ225510.1	-	3 - 4	332		57
	FQ226054.1	-	3 - 4	331		57
	FQ226408.1	-	3 - 4	331		57
	FQ227056.1	-	3 - 4	331		57
	FQ227293.1	-	3 - 4	331		57
	FQ227600.1	-	3 - 4	332		57
	FQ228002.1	-	3 - 4	331		57
	FQ228212.1	-	3 - 4	332		57
	FQ229290.1	-	3 - 4	333		57
	FQ229305.1	-	3 - 4	333		57
	FQ229367.1	-	3 - 4	332		57
	FQ229516.1	-	3 - 4	331		57
	FQ229579.1	-	3 - 4	331		57
	FQ229598.1	-	3 - 4	332		57
	FQ229712.1	-	3 - 4	331		57
	FQ229787.1	-	3 - 4	331		57
FQ229850.1	-	3 - 4			57
FQ229859.1	-	3 - 4	329		57
FQ229890.1	-	3 - 4	331		57
FQ229945.1	-	3 - 4	331		57
FQ229970.1	-	3 - 4	331		57
FQ230106.1	-	3 - 4	331		57
FQ230180.1	-	3 - 4	332		57
FQ230258.1	-	3 - 4	330		57
FQ231469.1	-	2 - 3	148		57
FQ231622.1	-	3 - 4	329		57
FQ232568.1	-	3 - 4	332		57
FQ233068.1	-	3 - 4	331		57
FQ233112.1	-	3 - 4	331		57
FQ233340.1	-	3 - 4	333		57
FQ233547.1	-	3 - 4	332		57
FQ233919.1	-	3 - 4	331		57
FQ234511.1	-	3 - 4	331		57
FQ234742.1	-	3 - 4	331		57
FQ234765.1	-	3 - 4	331		57
FQ234772.1	-	3 - 4	331		57

More Information

Additional Information:

Based on assay re-evaluation, this assay may detect genomic DNA. Please contact Tech Support if you need more information.

• Set Membership: Ambion siRNA available, Amplicon length less than or equal to 70, Mammalian Gene Collection, Detect Genomic DNA, Recommended Assay, Rattus norvegicus, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Rpsa

Panther Classification:

Molecular Function -

ribosomal protein

Gene Ontology Categories:

Process(es)

ribosomal small subunit assembly
endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
endonucleolytic cleavage to generate mature 3'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
rRNA export from nucleus
translation
single organismal cell-cell adhesion
epithelial cell differentiation

Function(s)

structural constituent of ribosome
laminin receptor activity
structural molecule activity
ribosome binding
laminin binding
poly(A) RNA binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Clariom S Assay	PSR0800013958.rn.1	TC0800001756.rn.1	RTA TC