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See other ABCC6 GT Assays ›
SNP ID:
rs9924755
Gene
ABCC6
Gene Name
Set Membership:
> HapMap > DME > Validated > Inventoried
Chromosome Location:
Chr.16: 16177552 - 16177552 on Build GRCh38
Polymorphism:
A/G, Transition substitution
Context Sequence [VIC/FAM]:

CCTGGTAGGAACCCATCTCTGCGAT[A/G]GCCCCATTTGCCAGCACTATGATCC

Assay ID C__25472644_20
Size VIC-FAM | 150 rxns
Availability Inventoried
Catalog # 4362691
Price
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Assay Details



Species:

 Human

dbSNP Submissions:

 NA

Phenotype:

 MIM: 603234

Literature Links:

 ABCC6 PubMed Links

Allele Nomenclature:

Minor Allele Frequency:
1000Genome Applied Biosystems® HapMap
Global
A (0.15)
(0.85)
Caucasian
A (0.18)
(0.82)
CEPH (CEU)
A (0.16)
(0.84)
EAS
A (0.07)
(0.93)
African American
A (0.23)
(0.77)
YRI (Yoruba)
A (0.27)
(0.73)
SAS
A (0.05)
(0.95)
Japanese
A (0.06)
(0.94)
JPT (Japanese)
A (0.12)
(0.88)
AFR
A (0.27)
(0.73)
Chinese
A (0.04)
(0.96)
CHB (Han Chinese)
A (0.10)
(0.90)
EUR
A (0.16)
(0.84)
AMR
A (0.17)
(0.83)
ABCC6 - ATP binding cassette subfamily C member 6
Transcript Accession SNP Location SNP Type Observed Codons Observed Amino Acid Protein ID
NM_001079528.3 2503 Intron NP_001072996.1
NM_001171.5 2503 Silent Mutation GCC,GCT A,A 830 NP_001162.4
XM_011522479.2 2503 Silent Mutation GCC,GCT A,A 819 XP_011520781.1
XM_011522480.1 2503 Silent Mutation GCC,GCT A,A 716 XP_011520782.1
XM_011522481.2 2503 Silent Mutation GCC,GCT A,A 716 XP_011520783.1
XM_011522482.2 2503 Silent Mutation GCC,GCT A,A 830 XP_011520784.1
XM_017023212.1 2503 Silent Mutation GCC,GCT A,A 774 XP_016878701.1
XM_017023213.1 2503 Silent Mutation GCC,GCT A,A 716 XP_016878702.1
XM_017023214.1 2503 Silent Mutation GCC,GCT A,A 830 XP_016878703.1

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