Rn03466772_pri

• Assay Name: rno-mir-409b
• Stem-loop ID: rno-mir-3578 rno-mir-369 rno-mir-409a rno-mir-409b rno-mir-412
• Mapped to miRBase Version: v22.1
• Stem-loop Location: Chr.6: 133893672 - 133893788 [-] on Build Rnor_6.0 Chr.6: 133893693 - 133893771 [+] on Build Rnor_6.0 Chr.6: 133893419 - 133893495 [+] on Build Rnor_6.0 Chr.6: 133893418 - 133893497 [-] on Build Rnor_6.0 Chr.6: 133893571 - 133893640 [+] on Build Rnor_6.0
• Mature miRNA ID: rno-miR-3578 rno-miR-369-5p rno-miR-369-3p rno-miR-409a-5p rno-miR-409a-3p rno-miR-409b rno-miR-412-5p rno-miR-412-3p
• Species: Rat
• Product Type: TaqMan^™ Pri-miRNA Assay

Assay Details

• Amplicon Length: 62
• Chromosome Location: Chr. 6 - 133893278 - 133893278 [-] on 133893278 Build Rnor_6.0
• Species: Rat

miRBase Details:

Species	miRBase ID	miRBase Accession Number
Rat	rno-miR-3578	MIMAT0017866
Rat	rno-miR-369-5p	MIMAT0003206
Rat	rno-miR-369-3p	MIMAT0003207
Rat	rno-miR-409a-5p	MIMAT0003204
Rat	rno-miR-409a-3p	MIMAT0003205
Rat	rno-miR-409b	MIMAT0017870
View More Rows
Rat	rno-miR-412-5p	MIMAT0017204
Rat	rno-miR-412-3p	MIMAT0003124

Stem-loop Details

Rat

Stem-loop ID	rno-mir-3578
Stem-loop Accession #	MI0015451
Stem-loop Sequence	UCUCCAAGCUGAGCAUUGAUACUGAGAAAAGAUCAACCAUGUAUUAUUCGAAGUCAGCUAAGCGAAUAUAACACGGUCGAUCUCCCUUCAAGUACCAGCAGAGGUGCCGAGCUGAGG
Chromosome Location	Chr. 6 - 133893672 - 133893788 [-] on Build Rnor_6.0
Mature MicroRNA	miRBase Accession #: MIMAT0017866 miRBase ID: rno-miR-3578 Mature miRNA Sequence: GCGAAUAUAACACGGUCGAUCU Chromosome Location: Chr. 6 - 133893672 - 133893788 [-] on Build Rnor_6.0
Gene Family ID	MIPF0001166, mir-3578
Distance to Amplicon	363 bases

Stem-loop ID	rno-mir-369
Stem-loop Accession #	MI0003551
Stem-loop Sequence	GGUACUUGAAGGGAGAUCGACCGUGUUAUAUUCGCUUAGCUGACUUCGAAUAAUACAUGGUUGAUCUUUUCUCAGUAUC
Chromosome Location	Chr. 6 - 133893693 - 133893771 [+] on Build Rnor_6.0
Mature MicroRNA	miRBase Accession #: MIMAT0003206 miRBase ID: rno-miR-369-5p Mature miRNA Sequence: AGAUCGACCGUGUUAUAUUCGC Chromosome Location: Chr. 6 - 133893693 - 133893771 [+] on Build Rnor_6.0 miRBase Accession #: MIMAT0003207 miRBase ID: rno-miR-369-3p Mature miRNA Sequence: AAUAAUACAUGGUUGAUCUUU Chromosome Location: Chr. 6 - 133893693 - 133893771 [+] on Build Rnor_6.0
Gene Family ID	MIPF0000018, mir-154
Distance to Amplicon	384 bases

Stem-loop ID	rno-mir-409a
Stem-loop Accession #	MI0003550
Stem-loop Sequence	GGUACUCGGAGAGAGGUUACCCGAGCAACUUUGCAUCUGGAGGACGAAUGUUGCUCGGUGAACCCCUUUUCGGUAUC
Chromosome Location	Chr. 6 - 133893419 - 133893495 [+] on Build Rnor_6.0
Mature MicroRNA	miRBase Accession #: MIMAT0003204 miRBase ID: rno-miR-409a-5p Mature miRNA Sequence: AGGUUACCCGAGCAACUUUGCAU Chromosome Location: Chr. 6 - 133893419 - 133893495 [+] on Build Rnor_6.0 miRBase Accession #: MIMAT0003205 miRBase ID: rno-miR-409a-3p Mature miRNA Sequence: AAUGUUGCUCGGUGAACCCC Chromosome Location: Chr. 6 - 133893419 - 133893495 [+] on Build Rnor_6.0
Gene Family ID	MIPF0000018, mir-154
Distance to Amplicon	110 bases

Stem-loop ID	rno-mir-409b
Stem-loop Accession #	MI0015454
Stem-loop Sequence	UUGAUACCGAAAAGGGGUUCACCGAGCAACAUUCGUCCUCCAGAUGCAAAGUUGCUCGGGUAACCUCUCUCCGAGUACCA
Chromosome Location	Chr. 6 - 133893418 - 133893497 [-] on Build Rnor_6.0
Mature MicroRNA	miRBase Accession #: MIMAT0017870 miRBase ID: rno-miR-409b Mature miRNA Sequence: AGGGGUUCACCGAGCAACAUUCG Chromosome Location: Chr. 6 - 133893418 - 133893497 [-] on Build Rnor_6.0
Gene Family ID	MIPF0000018, mir-154
Distance to Amplicon	109 bases

Stem-loop ID	rno-mir-412
Stem-loop Accession #	MI0003488
Stem-loop Sequence	GGGACGGAUGGUCGACCAGCUGGAAAGUAAUUGUUUCUAAUGUACUUCACCUGGUCCACUAGCCGUCGGU
Chromosome Location	Chr. 6 - 133893571 - 133893640 [+] on Build Rnor_6.0
Mature MicroRNA	miRBase Accession #: MIMAT0017204 miRBase ID: rno-miR-412-5p Mature miRNA Sequence: UGGUCGACCAGCUGGAAAGU Chromosome Location: Chr. 6 - 133893571 - 133893640 [+] on Build Rnor_6.0 miRBase Accession #: MIMAT0003124 miRBase ID: rno-miR-412-3p Mature miRNA Sequence: CUUCACCUGGUCCACUAGCCGU Chromosome Location: Chr. 6 - 133893571 - 133893640 [+] on Build Rnor_6.0
Gene Family ID	MIPF0000192, mir-412
Distance to Amplicon	262 bases

More Information

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miRBase Alias:

Rat: rno-mir-369 (v21)
Rat: rno-mir-409a (v21)
Rat: rno-mir-412 (v21)