Rn03464852_pri

• Assay Name: rno-mir-3576
• Stem-loop ID: rno-mir-3576 rno-mir-539
• Mapped to miRBase Version: v22.1
• Stem-loop Location: Chr.6: 133877812 - 133877926 [-] on Build Rnor_6.0 Chr.6: 133877832 - 133877907 [+] on Build Rnor_6.0
• Mature miRNA ID: rno-miR-3576 rno-miR-539-5p rno-miR-539-3p
• Species: Rat
• Product Type: TaqMan^™ Pri-miRNA Assay

Assay Details

• Amplicon Length: 76
• Chromosome Location: Chr. 6 - 133878180 - 133878180 [-] on 133878180 Build Rnor_6.0
• Species: Rat

miRBase Details:

Species	miRBase ID	miRBase Accession Number
Rat	rno-miR-3576	MIMAT0017862
Rat	rno-miR-539-5p	MIMAT0003176
Rat	rno-miR-539-3p	MIMAT0017212

Stem-loop Details

Rat

Stem-loop ID	rno-mir-3576
Stem-loop Accession #	MI0015448
Stem-loop Sequence	UCCGCCAGGGCAGUAUUUGAUACUCGAAAAGAAAUUACCCUUGUAUGAUUCAUCCAAAAGAGCAAACACACCAAGGAUAAUUUCUCCUCAAGUAUGAAACAGUAGCACAGCAGGA
Chromosome Location	Chr. 6 - 133877812 - 133877926 [-] on Build Rnor_6.0
Mature MicroRNA	miRBase Accession #: MIMAT0017862 miRBase ID: rno-miR-3576 Mature miRNA Sequence: ACACACCAAGGAUAAUUUCUCC Chromosome Location: Chr. 6 - 133877812 - 133877926 [-] on Build Rnor_6.0
Gene Family ID	MIPF0001166, mir-3578
Distance to Amplicon	226 bases

Stem-loop ID	rno-mir-539
Stem-loop Accession #	MI0003526
Stem-loop Sequence	AUACUUGAGGAGAAAUUAUCCUUGGUGUGUUUGCUCUUUUGGAUGAAUCAUACAAGGGUAAUUUCUUUUCGAGUAU
Chromosome Location	Chr. 6 - 133877832 - 133877907 [+] on Build Rnor_6.0
Mature MicroRNA	miRBase Accession #: MIMAT0003176 miRBase ID: rno-miR-539-5p Mature miRNA Sequence: GGAGAAAUUAUCCUUGGUGUGU Chromosome Location: Chr. 6 - 133877832 - 133877907 [+] on Build Rnor_6.0 miRBase Accession #: MIMAT0017212 miRBase ID: rno-miR-539-3p Mature miRNA Sequence: CAUACAAGGGUAAUUUCUUUUC Chromosome Location: Chr. 6 - 133877832 - 133877907 [+] on Build Rnor_6.0
Gene Family ID	MIPF0000018, mir-154
Distance to Amplicon	245 bases

More Information

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miRBase Alias:

Rat: rno-mir-539 (v21)