Name: [Hs01032185_m1] [NKAPP1]
Creator: Thermo Fisher Scientific
Keywords: [NKAPP1] Assay, [NFKB activating protein pseudogene 1] Assay

Assay Details

Gene Symbol: NKAPP1
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NR_027131.1		1 - 2	497		100
GenBank mRNA	AK093895.1	-	1 - 2	463		100
	BC022359.1	-	1 - 2	437		100
	BC113730.1	-	1 - 2	436		100
	BC113732.1	-	1 - 2	436		100

Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	Transcript Location	Amplicon Length
GenBankmRNA	DB202379.1	-	1 - 2	463	Chr. X - 120240252 - 120245233 [-] on Build GRCh38	100
GenBankmRNA	AW611964.1	-	2 - 3		Chr. X - 120238209 - 120245035 [+] on Build GRCh38	100
GenBankmRNA	DA017113.1	-	1 - 2	441	Chr. X - 120240281 - 120245211 [-] on Build GRCh38	100
GenBankmRNA	BG527810.1	-	1 - 2	438	Chr. X - 120238193 - 120245207 [-] on Build GRCh38	100
GenBankmRNA	DA017116.1	-	1 - 2	442	Chr. X - 120240280 - 120245211 [-] on Build GRCh38	100
GenBankmRNA	DA951669.1	-	1 - 2	467	Chr. X - 120240260 - 120245237 [-] on Build GRCh38	100
GenBankmRNA	DA226807.1	-	1 - 2	441	Chr. X - 120240244 - 120245211 [-] on Build GRCh38	100
GenBankmRNA	AW013941.1	-	2 - 3		Chr. X - 120238194 - 120244916 [+] on Build GRCh38	100

Adjacent Gene Details

	Gene name	Gene Symbol	Alias	Distance	Relative Direction	Location Chromsome
Upstream	Rhox homeobox family member 2	RHOXF2	CT107, PEPP-2, PEPP2, THG1	-76.2kb	Anti-sense	Chr. X - 120158534 - 120164039 on NCBI Build GRCh38
Downstream	zinc finger and BTB domain containing 33	ZBTB33	ZNF-kaiso, ZNF348	5.5kb	Anti-sense	Chr. X - 120250752 - 120258396 on NCBI Build GRCh38

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC0X00011392.hg.1
This assay targets the same location as HTA transcript cluster(s) TC0X001323.hg.1

Set Membership:

Amplicon length between 86 and 100

Mammalian Gene Collection

Homo sapiens

Probe spans exons

MicroArray Probes:

Affymetrix

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	TC0X00011392.hg.1	ENST00000452254.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0X00011392.hg.1	ENST00000452254.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0X00011392.hg.1	ENST00000452254.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0X00011392.hg.1	ENST00000452254.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0X00011392.hg.1	ENST00000452254.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0X00011392.hg.1	ENST00000452254.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0X00011392.hg.1	ENST00000452254.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0X00011392.hg.1	ENST00000536487.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0X00011392.hg.1	ENST00000536487.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0X00011392.hg.1	ENST00000554109.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0X00011392.hg.1	ENST00000554109.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0X00011392.hg.1	ENST00000554109.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0X00011392.hg.1	ENST00000554109.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0X00011392.hg.1	ENST00000554109.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0X00011392.hg.1	ENST00000585790.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0X00011392.hg.1	ENST00000585790.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0X00011392.hg.1	NR_027131.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0X00011392.hg.1	NR_027131.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0X00011392.hg.1	NR_027131.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0X00011392.hg.1	NR_027131.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0X00011392.hg.1	NR_027131.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0X00011392.hg.1	NR_027131.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0X00011392.hg.1	NR_027131.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0X00011392.hg.1	NR_027131.1	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR0X017746.hg.1	TC0X001323.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR0X017746.hg.1	ENST00000452254.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR0X017746.hg.1	NR_027131.1	Refseq
Affymetrix Human Clariom D Assay	PSR0X00179002.hg.1	ENST00000452254.2	Ensembl
Affymetrix Human Clariom D Assay	PSR0X00179002.hg.1	NR_027131.1	Refseq
Affymetrix Human Clariom D Assay	PSR0X00179002.hg.1	ENST00000452254.2	Ensembl
Affymetrix Human Clariom D Assay	PSR0X00179002.hg.1	NR_027131.1	Refseq
Affymetrix Human Clariom D Assay	PSR0X00179002.hg.1	TC0X00011392.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	TC0X00011392.hg.1	ENST00000452254.2	Ensembl
Affymetrix Human Clariom D Assay	TC0X00011392.hg.1	ENST00000452254.2	Ensembl
Affymetrix Human Clariom D Assay	TC0X00011392.hg.1	ENST00000452254.2	Ensembl
Affymetrix Human Clariom D Assay	TC0X00011392.hg.1	ENST00000452254.2	Ensembl
Affymetrix Human Clariom D Assay	TC0X00011392.hg.1	ENST00000452254.2	Ensembl
Affymetrix Human Clariom D Assay	TC0X00011392.hg.1	ENST00000452254.2	Ensembl
Affymetrix Human Clariom D Assay	TC0X00011392.hg.1	ENST00000452254.2	Ensembl
Affymetrix Human Clariom D Assay	TC0X00011392.hg.1	ENST00000536487.2	Ensembl
Affymetrix Human Clariom D Assay	TC0X00011392.hg.1	ENST00000536487.2	Ensembl
Affymetrix Human Clariom D Assay	TC0X00011392.hg.1	ENST00000554109.1	Ensembl
Affymetrix Human Clariom D Assay	TC0X00011392.hg.1	ENST00000554109.1	Ensembl
Affymetrix Human Clariom D Assay	TC0X00011392.hg.1	ENST00000554109.1	Ensembl
Affymetrix Human Clariom D Assay	TC0X00011392.hg.1	ENST00000554109.1	Ensembl
Affymetrix Human Clariom D Assay	TC0X00011392.hg.1	ENST00000554109.1	Ensembl
Affymetrix Human Clariom D Assay	TC0X00011392.hg.1	ENST00000585790.1	Ensembl
Affymetrix Human Clariom D Assay	TC0X00011392.hg.1	ENST00000585790.1	Ensembl
Affymetrix Human Clariom D Assay	TC0X00011392.hg.1	NR_027131.1	Refseq
Affymetrix Human Clariom D Assay	TC0X00011392.hg.1	NR_027131.1	Refseq
Affymetrix Human Clariom D Assay	TC0X00011392.hg.1	NR_027131.1	Refseq
Affymetrix Human Clariom D Assay	TC0X00011392.hg.1	NR_027131.1	Refseq
Affymetrix Human Clariom D Assay	TC0X00011392.hg.1	NR_027131.1	Refseq
Affymetrix Human Clariom D Assay	TC0X00011392.hg.1	NR_027131.1	Refseq
Affymetrix Human Clariom D Assay	TC0X00011392.hg.1	NR_027131.1	Refseq
Affymetrix Human Clariom D Assay	TC0X00011392.hg.1	NR_027131.1	Refseq

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Catalog #	4426961
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System Message

Genomic Map