Assay Details

Gene Symbol: LDB1
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001113407.2	NP_001106878.1	2 - 3	487		63
	NM_001321612.1	NP_001308541.1	2 - 3	487		63
	NM_003893.4	NP_003884.1	2 - 3	660		63
	XM_017016867.1	XP_016872356.1	2 - 3	195		63
	XM_017016868.1	XP_016872357.1	2 - 3	195		63
GenBank mRNA	AB016485.1	-	1 - 2	66		63
	AF064491.1	-	2 - 3	329		63
	AF068652.1	-	2 - 3	300		63
	AK300588.1	-	2 - 3	527		63
	AK308481.1	-	2 - 3	314		63
	BC000482.2	-	2 - 3	639	2964724	63
	BC009246.2	-	2 - 3	639	2964724	63
	CB988590.1	-	2 - 3	514		63
	CV575131.1	-	2 - 3	467		63

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC1000011669.hg.1
This assay targets the same location as HTA transcript cluster(s) TC10001617.hg.1

Additional Information:

This assay is in the 5'UTR region of the AB016485.1,AF064491.1,AF068652.1,AK300588.1,BC000482.2,BC009246.2,NM_003893.4 transcripts.

Set Membership:

Ambion siRNA available

Amplicon length less than or equal to 70

Mammalian Gene Collection

Detect Genomic DNA

Homo sapiens

Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene LDB1

Panther Classification:

Molecular Function -

transcription cofactor

Gene Ontology Categories:

Function(s) Process(es)

MicroArray Probes:

Affymetrix

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	PSR10021052.hg.1	ENST00000361198.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR10021052.hg.1	ENST00000425280.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR10021052.hg.1	ENST00000490751.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR10021052.hg.1	NM_001113407.2	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR10021052.hg.1	NM_003893.4	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR10021052.hg.1	TC10001617.hg.1	HTA TC
Affymetrix Human Clariom D Assay	PSR1000179877.hg.1	ENST00000361198.9	Ensembl
Affymetrix Human Clariom D Assay	PSR1000179877.hg.1	ENST00000425280.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1000179877.hg.1	ENST00000490751.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1000179877.hg.1	NM_001113407.2	Refseq
Affymetrix Human Clariom D Assay	PSR1000179877.hg.1	NM_003893.4	Refseq
Affymetrix Human Clariom D Assay	PSR1000179877.hg.1	ENST00000361198.9	Ensembl
Affymetrix Human Clariom D Assay	PSR1000179877.hg.1	ENST00000425280.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1000179877.hg.1	ENST00000490751.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1000179877.hg.1	NM_001113407.2	Refseq
Affymetrix Human Clariom D Assay	PSR1000179877.hg.1	NM_003893.4	Refseq
Affymetrix Human Clariom D Assay	PSR1000179877.hg.1	TC1000011669.hg.1	Clariom D TC

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