Name: [Hs02742979_s1] [CCDC177]
Creator: Thermo Fisher Scientific
Keywords: [CCDC177] Assay, [coiled-coil domain containing 177] Assay

Assay Details

Gene Symbol: CCDC177
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001271507.1	NP_001258436.1	2	3118		137
GenBank mRNA	AF284217.1	-	1	327		137
	AK312175.1	-	1	441		137
	BC105025.1	-	1	250		137
	BC105027.1	-	1	250		137

Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	Transcript Location	Amplicon Length
GenBankmRNA	BX352686.2	-	1	313	Chr. 14 - 69570286 - 69571183 [-] on Build GRCh38	137
GenBankmRNA	DA527415.1	-	1	441	Chr. 14 - 69570722 - 69571315 [-] on Build GRCh38	137
GenBankmRNA	BX346590.2	-	1	313	Chr. 14 - 69570286 - 69571183 [-] on Build GRCh38	137

Adjacent Gene Details

	Gene name	Gene Symbol	Alias	Distance	Relative Direction	Location Chromsome
Upstream	pleckstrin homology and coiled-coil domain containing D1	PLEKHD1	UPF0639	-40.5kb	Anti-sense	Chr. 14 - 69467744 - 69531551 on NCBI Build GRCh38
Downstream	sushi domain containing 6	SUSD6	DRAGO, KIAA0247	37.9kb	Anti-sense	Chr. 14 - 69611593 - 69715144 on NCBI Build GRCh38

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC1400009556.hg.1

Set Membership:

Amplicon length greater than or equal to 101

Mammalian Gene Collection

Detect Genomic DNA

Homo sapiens

Both primers and probe map within a single exon

MicroArray Probes:

Affymetrix

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	TC1400009556.hg.1	ENST00000599174.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1400009556.hg.1	ENST00000599174.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1400009556.hg.1	ENST00000599174.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1400009556.hg.1	ENST00000599174.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1400009556.hg.1	ENST00000599174.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1400009556.hg.1	NM_001271507.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1400009556.hg.1	NM_001271507.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1400009556.hg.1	NM_001271507.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1400009556.hg.1	NM_001271507.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1400009556.hg.1	NM_001271507.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1400009556.hg.1	NM_001271507.1	Refseq
Affymetrix Human Clariom D Assay	PSR1400170465.hg.1	ENST00000599174.2	Ensembl
Affymetrix Human Clariom D Assay	PSR1400170465.hg.1	NM_001271507.1	Refseq
Affymetrix Human Clariom D Assay	PSR1400170465.hg.1	ENST00000599174.2	Ensembl
Affymetrix Human Clariom D Assay	PSR1400170465.hg.1	NM_001271507.1	Refseq
Affymetrix Human Clariom D Assay	PSR1400170465.hg.1	TC1400009556.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR1400170464.hg.1	ENST00000599174.2	Ensembl
Affymetrix Human Clariom D Assay	PSR1400170464.hg.1	NM_001271507.1	Refseq
Affymetrix Human Clariom D Assay	PSR1400170464.hg.1	ENST00000599174.2	Ensembl
Affymetrix Human Clariom D Assay	PSR1400170464.hg.1	NM_001271507.1	Refseq
Affymetrix Human Clariom D Assay	PSR1400170464.hg.1	TC1400009556.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	TC1400009556.hg.1	ENST00000599174.2	Ensembl
Affymetrix Human Clariom D Assay	TC1400009556.hg.1	ENST00000599174.2	Ensembl
Affymetrix Human Clariom D Assay	TC1400009556.hg.1	ENST00000599174.2	Ensembl
Affymetrix Human Clariom D Assay	TC1400009556.hg.1	ENST00000599174.2	Ensembl
Affymetrix Human Clariom D Assay	TC1400009556.hg.1	ENST00000599174.2	Ensembl
Affymetrix Human Clariom D Assay	TC1400009556.hg.1	NM_001271507.1	Refseq
Affymetrix Human Clariom D Assay	TC1400009556.hg.1	NM_001271507.1	Refseq
Affymetrix Human Clariom D Assay	TC1400009556.hg.1	NM_001271507.1	Refseq
Affymetrix Human Clariom D Assay	TC1400009556.hg.1	NM_001271507.1	Refseq
Affymetrix Human Clariom D Assay	TC1400009556.hg.1	NM_001271507.1	Refseq
Affymetrix Human Clariom D Assay	TC1400009556.hg.1	NM_001271507.1	Refseq

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System Message

Genomic Map