Name: [Hs03298719_s1] [SCARNA8]
Creator: Thermo Fisher Scientific
Keywords: [SCARNA8] Assay, [small Cajal body-specific RNA 8] Assay

Assay Details

Gene Symbol: SCARNA8
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NR_003009.1		1	62		68
GenBank mRNA	AY077742.1	-	1	62		68

Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Transcript Location	Amplicon Length
GenBankmRNA	CV569582.1	-	1	258		Chr. 9 - 19063400 - 19063982 [-] on Build GRCh38	68

Adjacent Gene Details

	Gene name	Gene Symbol	Alias	Distance	Relative Direction	Location Chromsome
Upstream	HAUS augmin like complex subunit 6	HAUS6	Dgt6, FAM29A		Sense	Chr. 9 - 19053137 - 19102942 on NCBI Build GRCh38
Downstream	perilipin 2	PLIN2	ADFP, ADRP	44.6kb	Sense	Chr. 9 - 19108391 - 19127606 on NCBI Build GRCh38

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC0900009646.hg.1
This assay targets the same location as HTA transcript cluster(s) TC09000934.hg.1

Set Membership:

Amplicon length less than or equal to 70

3' Most

Detect Genomic DNA

Homo sapiens

Both primers and probe map within a single exon

MicroArray Probes:

Agilent Affymetrix ArrayStar Illumina

Array Name	Probe IDs	Targets	Target Type
Agilent Genotypic Designed Human Whole genome gene expression profiling microarray 4x44k	GT_HS_44k_4033	-	-
Agilent Genotypic Designed Human Whole genome gene expression profiling microarray 4x44k	GT_HS_44k_4032	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P26915952	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P26915938	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P06628011	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P26915922	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P26915946	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P26915935	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P26915940	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P26915949	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P06628014	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P26915912	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P26915948	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P26915929	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P26915941	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P06628039	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P26915924	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P26915953	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P26915939	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P26915909	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P06628012	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P26915937	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P26915925	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P26915932	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P26915921	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P26915945	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P26915944	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P26915914	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P26915915	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P26915923	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P06628026	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P26915928	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P26915954	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P26915933	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P26915936	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P06628027	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P26915931	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P26915947	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P06628036	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P26915950	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P06628005	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P26915909	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P26915937	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P06628039	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P26915947	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P26915923	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P06628027	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P26915914	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P26915949	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P06628014	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P26915931	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P26915924	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P26915922	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P26915929	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P26915928	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P06628026	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P26915915	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P26915935	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P26915954	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P26915941	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P26915938	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P26915952	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P26915921	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P06628012	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P26915945	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P26915944	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P26915950	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P06628005	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P06628011	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P26915946	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P26915933	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P26915912	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P26915948	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P26915953	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P26915940	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P06628036	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P26915936	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P26915925	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P26915939	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P26915932	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P06628015	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P16163517	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P06628017	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P06628008	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P16163522	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P06628045	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P06628050	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P06628039	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P16163520	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P06628030	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P06628006	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P06628010	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P06628037	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P06628047	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P06628038	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P06628025	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P06628052	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P06628043	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P06628011	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P06628019	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P06628021	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P06628041	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P06628005	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P06628013	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P06628028	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P06628049	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P06628033	-	-

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Gene 1.0 ST Array	NR_003009_at	-	-
Affymetrix Human Gene 1.0 ST Array	8160296	-	-
Affymetrix Human Gene 1.1 ST Array	8160295	-	-
Affymetrix Human Transcriptome Array 2.0	PSR09012497.hg.1	TC09000934.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR09012497.hg.1	ENST00000515924.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR09012497.hg.1	NR_003009.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0900009646.hg.1	ENST00000515924.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900009646.hg.1	NR_003009.1	Refseq
Affymetrix Human Clariom D Assay	TC0900009646.hg.1	ENST00000515924.1	Ensembl
Affymetrix Human Clariom D Assay	TC0900009646.hg.1	NR_003009.1	Refseq
Affymetrix Human Clariom D Assay	PSR0900166067.hg.1	ENST00000515924.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0900166067.hg.1	NR_003009.1	Refseq
Affymetrix Human Clariom D Assay	PSR0900166067.hg.1	ENST00000515924.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0900166067.hg.1	NR_003009.1	Refseq
Affymetrix Human Clariom D Assay	PSR0900166067.hg.1	TC0900009646.hg.1	Clariom D TC

Array Name	Probe IDs	Targets	Target Type
Arraystar Human LncRNA microarray V2.0	ASHG19A3A037151	-	-
Arraystar Human LncRNA microarray V2.0	ASHG19A3A037151	-	-

Array Name	Probe IDs	Targets	Target Type
HumanHT-12 v4 Expression BeadChip	ILMN_3247159	NR_003009.1	human_transcriptome
HumanHT-12 v4 Expression BeadChip	ILMN_3247159	AY077742.1	human_transcriptome
HumanHT-12 V4.0 expression beadchip	ILMN_3247159	NR_003009.1	human_transcriptome
HumanHT-12 V4.0 expression beadchip	ILMN_3247159	AY077742.1	human_transcriptome
Illumina HumanHT-12 WG-DASL V4.0 expression beadchip	ILMN_3247159	NR_003009.1	human_transcriptome
Illumina HumanHT-12 WG-DASL V4.0 expression beadchip	ILMN_3247159	AY077742.1	human_transcriptome
Illumina HumanHT-12 WG-DASL V4.0 R2 expression beadchip	ILMN_3247159	NR_003009.1	human_transcriptome
Illumina HumanHT-12 WG-DASL V4.0 R2 expression beadchip	ILMN_3247159	AY077742.1	human_transcriptome

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