XPA
Genomic Map
Back To TopAssay Details
| Gene Symbol: XPA | ||||||
|---|---|---|---|---|---|---|
| Interrogated Sequence | Translated Protein | Exon Boundary | Assay Location | IMAGE Clone ID | Amplicon Length | |
| RefSeq | NR_027302.1 | 5 - 6 | 797 | 95 | ||
| GenBank mRNA | AL531629.3 | - | 5 - 6 | 700 | 95 | |
Adjacent Gene Details
| Gene name | Gene Symbol | Alias | Distance | Relative Direction | Location Chromsome | |
|---|---|---|---|---|---|---|
| Upstream | nuclear cap binding protein subunit 1 | NCBP1 |
CBP80, NCBP, Sto1 |
-8.5kb | Anti-sense | Chr. 9 - 97633423 - 97673748 on NCBI Build GRCh38 |
| Downstream | papillary thyroid carcinoma susceptibility candidate 2 (non-protein coding) | PTCSC2 | 24.9kb | Sense | Chr. 9 - 97709920 - 97853093 on NCBI Build GRCh38 |
Back To TopMore Information
Updated Mapping Information
This assay targets the same location as Clariom D transcript cluster(s) TC0900010950.hg.1This assay targets the same location as HTA transcript cluster(s) TC09001397.hg.1
Set Membership: |
Amplicon length between 86 and 100
Homo sapiens
Probe spans exons
|
Gene Ontology Categories:
Function(s)
Process(es)
nucleotide-excision repair, DNA damage recognition
nucleotide-excision repair, DNA duplex unwinding
DNA repair
transcription-coupled nucleotide-excision repair
base-excision repair
nucleotide-excision repair, preincision complex stabilization
nucleotide-excision repair, preincision complex assembly
nucleotide-excision repair, DNA incision, 3'-to lesion
nucleotide-excision repair, DNA incision, 5'-to lesion
response to oxidative stress
intrinsic apoptotic signaling pathway in response to DNA damage
response to toxic substance
response to auditory stimulus
nucleotide-excision repair, DNA incision
multicellular organism growth
global genome nucleotide-excision repair
UV-damage excision repair
nucleotide-excision repair involved in interstrand cross-link repair
damaged DNA binding
protein binding
protein domain specific binding
protein homodimerization activity
metal ion binding
nucleotide-excision repair, DNA damage recognition
nucleotide-excision repair, DNA duplex unwinding
DNA repair
transcription-coupled nucleotide-excision repair
base-excision repair
nucleotide-excision repair, preincision complex stabilization
nucleotide-excision repair, preincision complex assembly
nucleotide-excision repair, DNA incision, 3'-to lesion
nucleotide-excision repair, DNA incision, 5'-to lesion
response to oxidative stress
intrinsic apoptotic signaling pathway in response to DNA damage
response to toxic substance
response to auditory stimulus
nucleotide-excision repair, DNA incision
multicellular organism growth
global genome nucleotide-excision repair
UV-damage excision repair
nucleotide-excision repair involved in interstrand cross-link repair
damaged DNA binding
protein binding
protein domain specific binding
protein homodimerization activity
metal ion binding
MicroArray Probes:
Affymetrix
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| Affymetrix Human Transcriptome Array 2.0 | PSR09017384.hg.1 | TC09001397.hg.1 | HTA TC |
| Affymetrix Human Transcriptome Array 2.0 | PSR09017384.hg.1 | NR_027302.1 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | PSR09017385.hg.1 | TC09001397.hg.1 | HTA TC |
| Affymetrix Human Transcriptome Array 2.0 | PSR09017385.hg.1 | ENST00000375128.4 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | PSR09017385.hg.1 | NM_000380.3 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | PSR09017385.hg.1 | NR_027302.1 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | TC0900010950.hg.1 | ENST00000375128.4 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0900010950.hg.1 | ENST00000375128.4 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0900010950.hg.1 | ENST00000375128.4 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0900010950.hg.1 | ENST00000375128.4 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0900010950.hg.1 | ENST00000375128.4 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0900010950.hg.1 | ENST00000375128.4 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0900010950.hg.1 | ENST00000375128.4 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0900010950.hg.1 | ENST00000375128.4 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0900010950.hg.1 | ENST00000375128.4 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0900010950.hg.1 | ENST00000375128.4 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0900010950.hg.1 | ENST00000375128.4 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0900010950.hg.1 | ENST00000462523.5 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0900010950.hg.1 | ENST00000462523.5 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0900010950.hg.1 | ENST00000462523.5 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0900010950.hg.1 | ENST00000462523.5 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0900010950.hg.1 | ENST00000462523.5 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0900010950.hg.1 | ENST00000462523.5 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0900010950.hg.1 | ENST00000462523.5 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0900010950.hg.1 | ENST00000462523.5 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0900010950.hg.1 | ENST00000462523.5 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0900010950.hg.1 | ENST00000462523.5 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0900010950.hg.1 | ENST00000462523.5 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0900010950.hg.1 | ENST00000462523.5 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0900010950.hg.1 | ENST00000485042.1 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0900010950.hg.1 | ENST00000485042.1 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0900010950.hg.1 | ENST00000485042.1 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0900010950.hg.1 | ENST00000496104.1 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0900010950.hg.1 | ENST00000496104.1 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0900010950.hg.1 | ENST00000496104.1 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0900010950.hg.1 | ENST00000496104.1 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0900010950.hg.1 | NM_000380.3 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | TC0900010950.hg.1 | NM_000380.3 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | TC0900010950.hg.1 | NM_000380.3 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | TC0900010950.hg.1 | NM_000380.3 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | TC0900010950.hg.1 | NM_000380.3 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | TC0900010950.hg.1 | NM_000380.3 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | TC0900010950.hg.1 | NM_000380.3 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | TC0900010950.hg.1 | NM_000380.3 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | TC0900010950.hg.1 | NM_000380.3 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | TC0900010950.hg.1 | NM_000380.3 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | TC0900010950.hg.1 | NM_000380.3 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | TC0900010950.hg.1 | NM_000380.3 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | TC0900010950.hg.1 | NR_027302.1 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | TC0900010950.hg.1 | NR_027302.1 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | TC0900010950.hg.1 | NR_027302.1 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | TC0900010950.hg.1 | NR_027302.1 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | TC0900010950.hg.1 | NR_027302.1 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | TC0900010950.hg.1 | NR_027302.1 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | TC0900010950.hg.1 | NR_027302.1 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | TC0900010950.hg.1 | NR_027302.1 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | TC0900010950.hg.1 | NR_027302.1 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | TC0900010950.hg.1 | NR_027302.1 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | TC0900010950.hg.1 | NR_027302.1 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | TC0900010950.hg.1 | NR_027302.1 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | TC0900010950.hg.1 | NR_027302.1 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | TC0900010950.hg.1 | NR_027302.1 | Refseq |
| Affymetrix Human Clariom D Assay | PSR0900174627.hg.1 | ENST00000375128.4 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR0900174627.hg.1 | ENST00000462523.5 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR0900174627.hg.1 | NM_000380.3 | Refseq |
| Affymetrix Human Clariom D Assay | PSR0900174627.hg.1 | NR_027302.1 | Refseq |
| Affymetrix Human Clariom D Assay | PSR0900174627.hg.1 | ENST00000375128.4 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR0900174627.hg.1 | ENST00000462523.5 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR0900174627.hg.1 | NM_000380.3 | Refseq |
| Affymetrix Human Clariom D Assay | PSR0900174627.hg.1 | NR_027302.1 | Refseq |
| Affymetrix Human Clariom D Assay | PSR0900174627.hg.1 | TC0900010950.hg.1 | Clariom D TC |
| Affymetrix Human Clariom D Assay | TC0900010950.hg.1 | ENST00000375128.4 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0900010950.hg.1 | ENST00000375128.4 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0900010950.hg.1 | ENST00000375128.4 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0900010950.hg.1 | ENST00000375128.4 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0900010950.hg.1 | ENST00000375128.4 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0900010950.hg.1 | ENST00000375128.4 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0900010950.hg.1 | ENST00000375128.4 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0900010950.hg.1 | ENST00000375128.4 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0900010950.hg.1 | ENST00000375128.4 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0900010950.hg.1 | ENST00000375128.4 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0900010950.hg.1 | ENST00000375128.4 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0900010950.hg.1 | ENST00000462523.5 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0900010950.hg.1 | ENST00000462523.5 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0900010950.hg.1 | ENST00000462523.5 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0900010950.hg.1 | ENST00000462523.5 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0900010950.hg.1 | ENST00000462523.5 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0900010950.hg.1 | ENST00000462523.5 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0900010950.hg.1 | ENST00000462523.5 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0900010950.hg.1 | ENST00000462523.5 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0900010950.hg.1 | ENST00000462523.5 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0900010950.hg.1 | ENST00000462523.5 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0900010950.hg.1 | ENST00000462523.5 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0900010950.hg.1 | ENST00000462523.5 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0900010950.hg.1 | ENST00000485042.1 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0900010950.hg.1 | ENST00000485042.1 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0900010950.hg.1 | ENST00000485042.1 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0900010950.hg.1 | ENST00000496104.1 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0900010950.hg.1 | ENST00000496104.1 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0900010950.hg.1 | ENST00000496104.1 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0900010950.hg.1 | ENST00000496104.1 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0900010950.hg.1 | NM_000380.3 | Refseq |
| Affymetrix Human Clariom D Assay | TC0900010950.hg.1 | NM_000380.3 | Refseq |
| Affymetrix Human Clariom D Assay | TC0900010950.hg.1 | NM_000380.3 | Refseq |
| Affymetrix Human Clariom D Assay | TC0900010950.hg.1 | NM_000380.3 | Refseq |
| Affymetrix Human Clariom D Assay | TC0900010950.hg.1 | NM_000380.3 | Refseq |
| Affymetrix Human Clariom D Assay | TC0900010950.hg.1 | NM_000380.3 | Refseq |
| Affymetrix Human Clariom D Assay | TC0900010950.hg.1 | NM_000380.3 | Refseq |
| Affymetrix Human Clariom D Assay | TC0900010950.hg.1 | NM_000380.3 | Refseq |
| Affymetrix Human Clariom D Assay | TC0900010950.hg.1 | NM_000380.3 | Refseq |
| Affymetrix Human Clariom D Assay | TC0900010950.hg.1 | NM_000380.3 | Refseq |
| Affymetrix Human Clariom D Assay | TC0900010950.hg.1 | NM_000380.3 | Refseq |
| Affymetrix Human Clariom D Assay | TC0900010950.hg.1 | NM_000380.3 | Refseq |
| Affymetrix Human Clariom D Assay | TC0900010950.hg.1 | NR_027302.1 | Refseq |
| Affymetrix Human Clariom D Assay | TC0900010950.hg.1 | NR_027302.1 | Refseq |
| Affymetrix Human Clariom D Assay | TC0900010950.hg.1 | NR_027302.1 | Refseq |
| Affymetrix Human Clariom D Assay | TC0900010950.hg.1 | NR_027302.1 | Refseq |
| Affymetrix Human Clariom D Assay | TC0900010950.hg.1 | NR_027302.1 | Refseq |
| Affymetrix Human Clariom D Assay | TC0900010950.hg.1 | NR_027302.1 | Refseq |
| Affymetrix Human Clariom D Assay | TC0900010950.hg.1 | NR_027302.1 | Refseq |
| Affymetrix Human Clariom D Assay | TC0900010950.hg.1 | NR_027302.1 | Refseq |
| Affymetrix Human Clariom D Assay | TC0900010950.hg.1 | NR_027302.1 | Refseq |
| Affymetrix Human Clariom D Assay | TC0900010950.hg.1 | NR_027302.1 | Refseq |
| Affymetrix Human Clariom D Assay | TC0900010950.hg.1 | NR_027302.1 | Refseq |
| Affymetrix Human Clariom D Assay | TC0900010950.hg.1 | NR_027302.1 | Refseq |
| Affymetrix Human Clariom D Assay | TC0900010950.hg.1 | NR_027302.1 | Refseq |
| Affymetrix Human Clariom D Assay | TC0900010950.hg.1 | NR_027302.1 | Refseq |
| Affymetrix Human Clariom D Assay | PSR0900174626.hg.1 | ENST00000462523.5 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR0900174626.hg.1 | NR_027302.1 | Refseq |
| Affymetrix Human Clariom D Assay | PSR0900174626.hg.1 | ENST00000462523.5 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR0900174626.hg.1 | NR_027302.1 | Refseq |
| Affymetrix Human Clariom D Assay | PSR0900174626.hg.1 | TC0900010950.hg.1 | Clariom D TC |
Back To Top