Assay Details

Gene Symbol: CCDC71L
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_175884.4	NP_787080.2	1	2879		73
GenBank mRNA	AK098422.1	-	1	648		73

Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	Transcript Location	Amplicon Length
GenBankmRNA	DB016005.1	-	1	329	Chr. 7 - 106658125 - 106658638 [-] on Build GRCh38	73
GenBankmRNA	CN483027.1	-	1	195	Chr. 7 - 106657879 - 106658498 [-] on Build GRCh38	73
GenBankmRNA	DB551220.1	-	1	407	Chr. 7 - 106658236 - 106658716 [-] on Build GRCh38	73

Adjacent Gene Details

	Gene name	Gene Symbol	Alias	Distance	Relative Direction	Location Chromsome
Upstream	nicotinamide phosphoribosyltransferase	NAMPT	1110035O14Rik, PBEF, PBEF1, VF, VISFATIN	-371.0kb	Sense	Chr. 7 - 106248285 - 106285732 on NCBI Build GRCh38
Downstream	phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit gamma	PIK3CG	PI3CG, PI3K, PI3Kgamma, PIK3, p110gamma, p120-PI3K	206.3kb	Anti-sense	Chr. 7 - 106865278 - 106908978 on NCBI Build GRCh38

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC0700012190.hg.1
This assay targets the same location as HTA transcript cluster(s) TC07001740.hg.1

Set Membership:

Ambion siRNA available

Amplicon length between 71 and 85

3' Most

Detect Genomic DNA

Homo sapiens

1700

Both primers and probe map within a single exon

Matching Ambion siRNAs:

Click here to find siRNAs for Gene CCDC71L

MicroArray Probes:

Affymetrix ABI

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	TC0700012190.hg.1	ENST00000315965.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0700012190.hg.1	ENST00000315965.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0700012190.hg.1	ENST00000315965.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0700012190.hg.1	ENST00000315965.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0700012190.hg.1	ENST00000523505.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0700012190.hg.1	ENST00000523505.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0700012190.hg.1	ENST00000523505.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0700012190.hg.1	ENST00000523505.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0700012190.hg.1	ENST00000523505.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0700012190.hg.1	ENST00000523505.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0700012190.hg.1	ENST00000523505.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0700012190.hg.1	ENST00000523505.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0700012190.hg.1	NM_175884.5	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0700012190.hg.1	NM_175884.5	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0700012190.hg.1	NM_175884.5	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0700012190.hg.1	NM_175884.5	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0700012190.hg.1	NM_175884.5	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0700012190.hg.1	NM_175884.5	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0700012190.hg.1	NM_175884.5	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0700012190.hg.1	NM_175884.5	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0700012190.hg.1	NM_175884.5	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR07027073.hg.1	ENST00000523505.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR07027073.hg.1	NM_175884.5	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR07027073.hg.1	TC07001740.hg.1	HTA TC
Affymetrix Human Clariom D Assay	PSR0700187915.hg.1	ENST00000523505.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0700187915.hg.1	NM_175884.5	Refseq
Affymetrix Human Clariom D Assay	PSR0700187915.hg.1	ENST00000523505.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0700187915.hg.1	NM_175884.5	Refseq
Affymetrix Human Clariom D Assay	PSR0700187915.hg.1	TC0700012190.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR0700187914.hg.1	ENST00000523505.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0700187914.hg.1	NM_175884.5	Refseq
Affymetrix Human Clariom D Assay	PSR0700187914.hg.1	ENST00000523505.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0700187914.hg.1	NM_175884.5	Refseq
Affymetrix Human Clariom D Assay	PSR0700187914.hg.1	TC0700012190.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	TC0700012190.hg.1	ENST00000315965.6	Ensembl
Affymetrix Human Clariom D Assay	TC0700012190.hg.1	ENST00000315965.6	Ensembl
Affymetrix Human Clariom D Assay	TC0700012190.hg.1	ENST00000315965.6	Ensembl
Affymetrix Human Clariom D Assay	TC0700012190.hg.1	ENST00000315965.6	Ensembl
Affymetrix Human Clariom D Assay	TC0700012190.hg.1	ENST00000523505.1	Ensembl
Affymetrix Human Clariom D Assay	TC0700012190.hg.1	ENST00000523505.1	Ensembl
Affymetrix Human Clariom D Assay	TC0700012190.hg.1	ENST00000523505.1	Ensembl
Affymetrix Human Clariom D Assay	TC0700012190.hg.1	ENST00000523505.1	Ensembl
Affymetrix Human Clariom D Assay	TC0700012190.hg.1	ENST00000523505.1	Ensembl
Affymetrix Human Clariom D Assay	TC0700012190.hg.1	ENST00000523505.1	Ensembl
Affymetrix Human Clariom D Assay	TC0700012190.hg.1	ENST00000523505.1	Ensembl
Affymetrix Human Clariom D Assay	TC0700012190.hg.1	ENST00000523505.1	Ensembl
Affymetrix Human Clariom D Assay	TC0700012190.hg.1	NM_175884.5	Refseq
Affymetrix Human Clariom D Assay	TC0700012190.hg.1	NM_175884.5	Refseq
Affymetrix Human Clariom D Assay	TC0700012190.hg.1	NM_175884.5	Refseq
Affymetrix Human Clariom D Assay	TC0700012190.hg.1	NM_175884.5	Refseq
Affymetrix Human Clariom D Assay	TC0700012190.hg.1	NM_175884.5	Refseq
Affymetrix Human Clariom D Assay	TC0700012190.hg.1	NM_175884.5	Refseq
Affymetrix Human Clariom D Assay	TC0700012190.hg.1	NM_175884.5	Refseq
Affymetrix Human Clariom D Assay	TC0700012190.hg.1	NM_175884.5	Refseq
Affymetrix Human Clariom D Assay	TC0700012190.hg.1	NM_175884.5	Refseq

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Catalog #	4426961
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System Message

Genomic Map