Name: [Hs03923517_s1] [IBA57-AS1]
Creator: Thermo Fisher Scientific
Keywords: [IBA57-AS1] Assay, [IBA57 antisense RNA 1 (head to head)] Assay

Assay Details

Gene Symbol: IBA57-AS1
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NR_103539.1		2	453		96
RefSeq	NR_103540.1		2	297		96
GenBank mRNA	BX114038.1	-	2	452		96

Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	Transcript Location	Amplicon Length
GenBankmRNA	AA918455.1	-	1		Chr. 1 - 228164094 - 228164389 [+] on Build GRCh38	96
GenBankmRNA	AA460006.1	-	1		Chr. 1 - 228164125 - 228164386 [+] on Build GRCh38	96
GenBankmRNA	HY192797.1	-	1		Chr. 1 - 228164095 - 228164490 [+] on Build GRCh38	96
GenBankmRNA	AA608911.1	-	1		Chr. 1 - 228164124 - 228164669 [+] on Build GRCh38	96
GenBankmRNA	BF907361.1	-	1		Chr. 1 - 228164104 - 228164296 [+] on Build GRCh38	97
GenBankmRNA	AK057440.1	-	1	955	Chr. 1 - 228164125 - 228165014 [-] on Build GRCh38	96
GenBankmRNA	AA770209.1	-	1		Chr. 1 - 228164094 - 228164671 [+] on Build GRCh38	96

Adjacent Gene Details

	Gene name	Gene Symbol	Alias	Distance	Relative Direction	Location Chromsome
Upstream	gap junction protein gamma 2	GJC2	CX46.6, Cx47, GJA12, HLD2, LMPH1C, PMLDAR, SPG44	-4.3kb	Anti-sense	Chr. 1 - 228149714 - 228159826 on NCBI Build GRCh38
Downstream	IBA57 homolog, iron-sulfur cluster assembly	IBA57	C1orf69, MMDS3, SPG74	714.0	Anti-sense	Chr. 1 - 228165808 - 228182257 on NCBI Build GRCh38

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC0100017594.hg.1

Set Membership:

Amplicon length between 86 and 100

3' Most

Detect Genomic DNA

Homo sapiens

1700

Both primers and probe map within a single exon

MicroArray Probes:

Affymetrix ABI

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	TC0100017594.hg.1	ENST00000366713.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100017594.hg.1	ENST00000366713.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100017594.hg.1	ENST00000496552.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100017594.hg.1	ENST00000496552.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100017594.hg.1	NR_103539.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0100017594.hg.1	NR_103539.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0100017594.hg.1	NR_103540.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0100017594.hg.1	NR_103540.1	Refseq
Affymetrix Human Clariom D Assay	TC0100017594.hg.1	ENST00000366713.1	Ensembl
Affymetrix Human Clariom D Assay	TC0100017594.hg.1	ENST00000366713.1	Ensembl
Affymetrix Human Clariom D Assay	TC0100017594.hg.1	ENST00000496552.1	Ensembl
Affymetrix Human Clariom D Assay	TC0100017594.hg.1	ENST00000496552.1	Ensembl
Affymetrix Human Clariom D Assay	TC0100017594.hg.1	NR_103539.1	Refseq
Affymetrix Human Clariom D Assay	TC0100017594.hg.1	NR_103539.1	Refseq
Affymetrix Human Clariom D Assay	TC0100017594.hg.1	NR_103540.1	Refseq
Affymetrix Human Clariom D Assay	TC0100017594.hg.1	NR_103540.1	Refseq
Affymetrix Human Clariom D Assay	PSR0100233035.hg.1	ENST00000366713.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0100233035.hg.1	NR_103540.1	Refseq
Affymetrix Human Clariom D Assay	PSR0100233035.hg.1	ENST00000366713.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0100233035.hg.1	NR_103540.1	Refseq
Affymetrix Human Clariom D Assay	PSR0100233035.hg.1	TC0100017594.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR0100233033.hg.1	ENST00000366713.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0100233033.hg.1	ENST00000496552.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0100233033.hg.1	NR_103539.1	Refseq
Affymetrix Human Clariom D Assay	PSR0100233033.hg.1	NR_103540.1	Refseq
Affymetrix Human Clariom D Assay	PSR0100233033.hg.1	ENST00000366713.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0100233033.hg.1	ENST00000496552.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0100233033.hg.1	NR_103539.1	Refseq
Affymetrix Human Clariom D Assay	PSR0100233033.hg.1	NR_103540.1	Refseq
Affymetrix Human Clariom D Assay	PSR0100233033.hg.1	TC0100017594.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR0100233034.hg.1	ENST00000496552.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0100233034.hg.1	NR_103539.1	Refseq
Affymetrix Human Clariom D Assay	PSR0100233034.hg.1	ENST00000496552.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0100233034.hg.1	NR_103539.1	Refseq
Affymetrix Human Clariom D Assay	PSR0100233034.hg.1	TC0100017594.hg.1	Clariom D TC
Human Genome U133 Plus 2.0 Array	1569300_PM_at	-	-
Human Genome U133 Plus 2.0 Array	1569300_at	-	-
Human Genome U133 Plus 2.0 Array	238188_at	-	-
Human Genome U133 Plus 2.0 Array	238188_PM_at	-	-

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