Assay Details

Gene Symbol: MIR3178
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NR_036139.1		1	39		53

Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Transcript Location	Amplicon Length
GenBankmRNA	DB334915.1	-	1	368		Chr. 16 - 2531799 - 2532331 [-] on Build GRCh38	53

Adjacent Gene Details

	Gene name	Gene Symbol	Alias	Distance	Relative Direction	Location Chromsome
Upstream	cementum protein 1	CEMP1	CP-23, CP23	-514.0	Sense	Chr. 16 - 2530035 - 2531408 on NCBI Build GRCh38
Downstream	3-phosphoinositide dependent protein kinase 1	PDPK1	PDK1, PDPK2, PDPK2P, PRO0461	6.0kb	Anti-sense	Chr. 16 - 2537964 - 2603190 on NCBI Build GRCh38

More Information

Updated Mapping Information

This assay is designed to target a precursor miRNA (pre-miRNA) target. It may not discriminate between the primary transcript (pri-miRNA) and the pre-miRNA for this miRNA. If you are looking for an assay to detect the mature miRNA, please search the MicroRNA collection of assays.
This assay targets the same location as Clariom D transcript cluster(s) TC1600009121.hg.1
This assay targets the same location as HTA transcript cluster(s) TC16000785.hg.1

Set Membership:

Amplicon length less than or equal to 70

3' Most

Detect Genomic DNA

Homo sapiens

Both primers and probe map within a single exon

MicroArray Probes:

Affymetrix

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	TC1600009121.hg.1	ENST00000581887.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1600009121.hg.1	NR_036139.1	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR16011547.hg.1	NR_036139.1	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR16011547.hg.1	TC16000785.hg.1	HTA TC
Affymetrix Human Clariom D Assay	TC1600009121.hg.1	ENST00000581887.1	Ensembl
Affymetrix Human Clariom D Assay	TC1600009121.hg.1	NR_036139.1	Refseq
Affymetrix Human Clariom D Assay	PSR1600169428.hg.1	ENST00000581887.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1600169428.hg.1	NR_036139.1	Refseq
Affymetrix Human Clariom D Assay	PSR1600169428.hg.1	ENST00000581887.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1600169428.hg.1	NR_036139.1	Refseq
Affymetrix Human Clariom D Assay	PSR1600169428.hg.1	TC1600009121.hg.1	Clariom D TC

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System Message

Genomic Map