Name: [Hs04232243_s1] [GAS5-AS1]
Creator: Thermo Fisher Scientific
Keywords: [GAS5-AS1] Assay, [GAS5 antisense RNA 1] Assay

Assay Details

Gene Symbol: GAS5-AS1
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NR_037605.1		1	145		75
GenBank mRNA	AF088026.1	-	1	145		75

Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	Transcript Location	Amplicon Length
GenBankmRNA	W39642.1	-		144	Chr. - - [-] on Build	75
GenBankmRNA	DA168988.1	-	1	47	Chr. 1 - 173863346 - 173863908 [+] on Build GRCh38	75
GenBankmRNA	BQ184822.1	-	1		Chr. 1 - 173863253 - 173863941 [-] on Build GRCh38	75
GenBankmRNA	AA296410.1	-	1	135	Chr. 1 - 173863258 - 173863578 [+] on Build GRCh38	75
GenBankmRNA	BX102112.1	-	1	145	Chr. 1 - 173863248 - 173863941 [+] on Build GRCh38	75
GenBankmRNA	BQ187737.1	-	2	304	Chr. 1 - 173862152 - 173863731 [+] on Build GRCh38	75

Adjacent Gene Details

	Gene name	Gene Symbol	Alias	Distance	Relative Direction	Location Chromsome
Upstream	growth arrest specific 5 (non-protein coding)	GAS5	NCRNA00030, SNHG2		Anti-sense	Chr. 1 - 173863901 - 173867987 on NCBI Build GRCh38
Downstream	small nucleolar RNA, C/D box 81	SNORD81	RNU104, U81, Z23	234.0	Anti-sense	Chr. 1 - 173864175 - 173864217 on NCBI Build GRCh38

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC0100010662.hg.1
This assay targets the same location as HTA transcript cluster(s) TC01001517.hg.1

Set Membership:

Amplicon length between 71 and 85

3' Most

Detect Genomic DNA

Homo sapiens

Both primers and probe map within a single exon

MicroArray Probes:

Agilent Affymetrix ArrayStar

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	PSR01023457.hg.1	TC01001517.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR01023457.hg.1	ENST00000416578.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR01023457.hg.1	NR_037605.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0100010662.hg.1	ENST00000602767.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100010662.hg.1	NR_037605.1	Refseq
Affymetrix Human Clariom D Assay	TC0100010662.hg.1	ENST00000602767.1	Ensembl
Affymetrix Human Clariom D Assay	TC0100010662.hg.1	NR_037605.1	Refseq
Affymetrix Human Clariom D Assay	PSR0100178388.hg.1	ENST00000602767.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0100178388.hg.1	NR_037605.1	Refseq
Affymetrix Human Clariom D Assay	PSR0100178388.hg.1	ENST00000602767.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0100178388.hg.1	NR_037605.1	Refseq
Affymetrix Human Clariom D Assay	PSR0100178388.hg.1	TC0100010662.hg.1	Clariom D TC

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Array Name	Probe IDs	Targets	Target Type
Agilent Genotypic Designed Human Whole genome gene expression profiling microarray 4x44k	GT_44k_32_P307211	-	-
Agilent Whole Human Genome Oligo Microarray 4x44K	29974	-	-
Whole Human Genome Oligo Microarray G4112A	A_32_P307211	-	-
Agilent Whole Human Genome Microarray 4x44K G4112F	A_32_P307211	-	-
Agilent Human 1B Microarray G4111A	A_32_P307211	-	-

System Message

Genomic Map