Name: [Hs04273530_m1] [LMCD1-AS1]
Creator: Thermo Fisher Scientific
Keywords: [LMCD1-AS1] Assay, [LMCD1 antisense RNA 1 (head to head)] Assay

Assay Details

Gene Symbol: LMCD1-AS1
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NR_033378.1		2 - 3	493		172
GenBank mRNA	AK124088.1	-	2 - 3	489		172

Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	Transcript Location	Amplicon Length
GenBankmRNA	DA394681.1	-	2 - 3	438	Chr. 3 - 8195017 - 8501603 [-] on Build GRCh38	172
GenBankmRNA	DB013841.1	-	2 - 3	479	Chr. 3 - 8222687 - 8501643 [-] on Build GRCh38	172
GenBankmRNA	HY337582.1	-	2 - 3		Chr. 3 - 8194979 - 8498853 [+] on Build GRCh38	172
GenBankmRNA	BX394538.2	-	2 - 3	432	Chr. 3 - 8494668 - 8501598 [-] on Build GRCh38	172
GenBankmRNA	HY306359.1	-	2 - 3		Chr. 3 - 8194979 - 8498807 [+] on Build GRCh38	172

Adjacent Gene Details

	Gene name	Gene Symbol	Alias	Distance	Relative Direction	Location Chromsome
Upstream	uncharacterized LOC101927394	LOC101927394		-478.4kb	Sense	Chr. 3 - 7952805 - 8016307 on NCBI Build GRCh38
Downstream	LIM and cysteine rich domains 1	LMCD1		3.0kb	Anti-sense	Chr. 3 - 8501807 - 8568125 on NCBI Build GRCh38

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC0300013928.hg.1
This assay targets the same location as HTA transcript cluster(s) TC03001140.hg.1

Set Membership:

Amplicon length greater than or equal to 101

Homo sapiens

Probe spans exons

MicroArray Probes:

Affymetrix

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	PSR03019544.hg.1	NR_033378.1	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR03019544.hg.1	TC03001140.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR03019545.hg.1	NR_033378.1	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR03019545.hg.1	TC03001140.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR03019546.hg.1	NR_033378.1	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR03019546.hg.1	TC03001140.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR03019547.hg.1	NR_033378.1	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR03019547.hg.1	TC03001140.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR03019542.hg.1	NR_033378.1	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR03019542.hg.1	TC03001140.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	TC0300013928.hg.1	ENST00000420095.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0300013928.hg.1	ENST00000420095.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0300013928.hg.1	ENST00000420095.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0300013928.hg.1	ENST00000420095.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0300013928.hg.1	ENST00000452802.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0300013928.hg.1	ENST00000452802.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0300013928.hg.1	ENST00000452802.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0300013928.hg.1	ENST00000452802.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0300013928.hg.1	ENST00000452802.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0300013928.hg.1	ENST00000452802.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0300013928.hg.1	ENST00000452802.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0300013928.hg.1	ENST00000452802.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0300013928.hg.1	ENST00000455811.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0300013928.hg.1	ENST00000455811.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0300013928.hg.1	ENST00000455811.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0300013928.hg.1	NR_033378.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0300013928.hg.1	NR_033378.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0300013928.hg.1	NR_033378.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0300013928.hg.1	NR_033378.1	Refseq
Affymetrix Human Clariom D Assay	PSR0300206338.hg.1	ENST00000420095.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0300206338.hg.1	ENST00000452802.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0300206338.hg.1	ENST00000452802.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0300206338.hg.1	NR_033378.1	Refseq
Affymetrix Human Clariom D Assay	PSR0300206338.hg.1	ENST00000420095.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0300206338.hg.1	ENST00000452802.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0300206338.hg.1	ENST00000452802.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0300206338.hg.1	NR_033378.1	Refseq
Affymetrix Human Clariom D Assay	PSR0300206338.hg.1	TC0300013928.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR0300206340.hg.1	ENST00000420095.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0300206340.hg.1	ENST00000452802.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0300206340.hg.1	ENST00000452802.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0300206340.hg.1	ENST00000455811.2	Ensembl
Affymetrix Human Clariom D Assay	PSR0300206340.hg.1	NR_033378.1	Refseq
Affymetrix Human Clariom D Assay	PSR0300206340.hg.1	ENST00000420095.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0300206340.hg.1	ENST00000452802.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0300206340.hg.1	ENST00000452802.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0300206340.hg.1	ENST00000455811.2	Ensembl
Affymetrix Human Clariom D Assay	PSR0300206340.hg.1	NR_033378.1	Refseq
Affymetrix Human Clariom D Assay	PSR0300206340.hg.1	TC0300013928.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR0300206341.hg.1	ENST00000420095.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0300206341.hg.1	ENST00000452802.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0300206341.hg.1	ENST00000452802.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0300206341.hg.1	ENST00000455811.2	Ensembl
Affymetrix Human Clariom D Assay	PSR0300206341.hg.1	NR_033378.1	Refseq
Affymetrix Human Clariom D Assay	PSR0300206341.hg.1	ENST00000420095.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0300206341.hg.1	ENST00000452802.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0300206341.hg.1	ENST00000452802.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0300206341.hg.1	ENST00000455811.2	Ensembl
Affymetrix Human Clariom D Assay	PSR0300206341.hg.1	NR_033378.1	Refseq
Affymetrix Human Clariom D Assay	PSR0300206341.hg.1	TC0300013928.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	TC0300013928.hg.1	ENST00000420095.1	Ensembl
Affymetrix Human Clariom D Assay	TC0300013928.hg.1	ENST00000420095.1	Ensembl
Affymetrix Human Clariom D Assay	TC0300013928.hg.1	ENST00000420095.1	Ensembl
Affymetrix Human Clariom D Assay	TC0300013928.hg.1	ENST00000420095.1	Ensembl
Affymetrix Human Clariom D Assay	TC0300013928.hg.1	ENST00000452802.1	Ensembl
Affymetrix Human Clariom D Assay	TC0300013928.hg.1	ENST00000452802.1	Ensembl
Affymetrix Human Clariom D Assay	TC0300013928.hg.1	ENST00000452802.1	Ensembl
Affymetrix Human Clariom D Assay	TC0300013928.hg.1	ENST00000452802.1	Ensembl
Affymetrix Human Clariom D Assay	TC0300013928.hg.1	ENST00000452802.1	Ensembl
Affymetrix Human Clariom D Assay	TC0300013928.hg.1	ENST00000452802.1	Ensembl
Affymetrix Human Clariom D Assay	TC0300013928.hg.1	ENST00000452802.1	Ensembl
Affymetrix Human Clariom D Assay	TC0300013928.hg.1	ENST00000452802.1	Ensembl
Affymetrix Human Clariom D Assay	TC0300013928.hg.1	ENST00000455811.2	Ensembl
Affymetrix Human Clariom D Assay	TC0300013928.hg.1	ENST00000455811.2	Ensembl
Affymetrix Human Clariom D Assay	TC0300013928.hg.1	ENST00000455811.2	Ensembl
Affymetrix Human Clariom D Assay	TC0300013928.hg.1	NR_033378.1	Refseq
Affymetrix Human Clariom D Assay	TC0300013928.hg.1	NR_033378.1	Refseq
Affymetrix Human Clariom D Assay	TC0300013928.hg.1	NR_033378.1	Refseq
Affymetrix Human Clariom D Assay	TC0300013928.hg.1	NR_033378.1	Refseq

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Genomic Map