Name: [Hs04275428_m1] [HTT-AS]
Creator: Thermo Fisher Scientific
Keywords: [HTT-AS] Assay, [HTT antisense RNA (head to head)] Assay

Assay Details

Gene Symbol: HTT-AS
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NR_045414.1		1 - 2	89		140
GenBank mRNA	DA153759.1	-	1 - 2	89		140

Adjacent Gene Details

	Gene name	Gene Symbol	Alias	Distance	Relative Direction	Location Chromsome
Upstream	huntingtin	HTT	HD, IT15		Anti-sense	Chr. 4 - 3074510 - 3243960 on NCBI Build GRCh38
Downstream	Myb/SANT DNA binding domain containing 1	MSANTD1	C4orf44	167.1kb	Anti-sense	Chr. 4 - 3243728 - 3256615 on NCBI Build GRCh38

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC0400009799.hg.1
This assay targets the same location as HTA transcript cluster(s) TC04000980.hg.1

Set Membership:

Amplicon length greater than or equal to 101

Homo sapiens

Probe spans exons

MicroArray Probes:

Affymetrix

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	TC0400006590.hg.1	ENST00000621529.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0400009799.hg.1	ENST00000503893.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0400009799.hg.1	ENST00000503893.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0400009799.hg.1	ENST00000503893.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0400009799.hg.1	ENST00000503893.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0400009799.hg.1	NR_045414.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0400009799.hg.1	NR_045414.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0400009799.hg.1	NR_045414.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0400009799.hg.1	NR_045414.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0400009799.hg.1	NR_045414.1	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR04013588.hg.1	TC04000980.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR04013588.hg.1	ENST00000503893.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR04013588.hg.1	NR_045414.1	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR04013587.hg.1	TC04000980.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR04013587.hg.1	ENST00000503893.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR04013587.hg.1	NR_045414.1	Refseq
Affymetrix Human Clariom D Assay	PSR0400167404.hg.1	ENST00000503893.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0400167404.hg.1	NR_045414.1	Refseq
Affymetrix Human Clariom D Assay	PSR0400167404.hg.1	ENST00000503893.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0400167404.hg.1	NR_045414.1	Refseq
Affymetrix Human Clariom D Assay	PSR0400167404.hg.1	TC0400009799.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	TC0400009799.hg.1	ENST00000503893.1	Ensembl
Affymetrix Human Clariom D Assay	TC0400009799.hg.1	ENST00000503893.1	Ensembl
Affymetrix Human Clariom D Assay	TC0400009799.hg.1	ENST00000503893.1	Ensembl
Affymetrix Human Clariom D Assay	TC0400009799.hg.1	ENST00000503893.1	Ensembl
Affymetrix Human Clariom D Assay	TC0400009799.hg.1	NR_045414.1	Refseq
Affymetrix Human Clariom D Assay	TC0400009799.hg.1	NR_045414.1	Refseq
Affymetrix Human Clariom D Assay	TC0400009799.hg.1	NR_045414.1	Refseq
Affymetrix Human Clariom D Assay	TC0400009799.hg.1	NR_045414.1	Refseq
Affymetrix Human Clariom D Assay	TC0400009799.hg.1	NR_045414.1	Refseq
Affymetrix Human Clariom D Assay	PSR0400167403.hg.1	ENST00000503893.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0400167403.hg.1	NR_045414.1	Refseq
Affymetrix Human Clariom D Assay	PSR0400167403.hg.1	ENST00000503893.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0400167403.hg.1	NR_045414.1	Refseq
Affymetrix Human Clariom D Assay	PSR0400167403.hg.1	TC0400009799.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	TC0400006590.hg.1	ENST00000621529.1	Ensembl

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Catalog #	4426961
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System Message

Genomic Map