Name: [Hs04402340_m1] [LOC100505942]
Creator: Thermo Fisher Scientific
Keywords: [LOC100505942] Assay, [uncharacterized LOC100505942] Assay

Assay Details

Gene Symbol: LOC100505942
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NR_104656.1		1 - 2	430		119

Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	Transcript Location	Amplicon Length
GenBankmRNA	BM678110.1	-	1 - 2		Chr. 16 - 67517950 - 67528536 [+] on Build GRCh38	119
GenBankmRNA	BM727709.1	-	1 - 2	224	Chr. 16 - 67518130 - 67528539 [-] on Build GRCh38	119
GenBankmRNA	BM725630.1	-	1 - 2	221	Chr. 16 - 67518082 - 67528536 [-] on Build GRCh38	119
GenBankmRNA	BX104563.1	-	1 - 2	332	Chr. 16 - 67518036 - 67528648 [-] on Build GRCh38	119
GenBankmRNA	AI632750.1	-	1 - 2		Chr. 16 - 67517952 - 67528401 [+] on Build GRCh38	119
GenBankmRNA	BQ441460.1	-	1 - 2	363	Chr. 16 - 67517961 - 67528675 [-] on Build GRCh38	119
GenBankmRNA	CA431156.1	-	1 - 2		Chr. 16 - 67517950 - 67528536 [+] on Build GRCh38	119

Adjacent Gene Details

	Gene name	Gene Symbol	Alias	Distance	Relative Direction	Location Chromsome
Upstream	agouti related neuropeptide	AGRP	AGRT, ART, ASIP2	-33.6kb	Sense	Chr. 16 - 67482571 - 67483813 on NCBI Build GRCh38
Downstream	family with sequence similarity 65 member A	FAM65A		69.0	Anti-sense	Chr. 16 - 67528814 - 67546788 on NCBI Build GRCh38

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC1600010637.hg.1

Set Membership:

Amplicon length greater than or equal to 101

3' Most

Homo sapiens

Probe spans exons

MicroArray Probes:

Affymetrix

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	TC1600010637.hg.1	ENST00000613438.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1600010637.hg.1	ENST00000613438.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1600010637.hg.1	ENST00000613438.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1600010637.hg.1	ENST00000613438.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1600010637.hg.1	ENST00000621378.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1600010637.hg.1	ENST00000621378.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1600010637.hg.1	ENST00000621378.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1600010637.hg.1	ENST00000621378.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1600010637.hg.1	ENST00000621378.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1600010637.hg.1	NR_104656.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1600010637.hg.1	NR_104656.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1600010637.hg.1	NR_104656.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1600010637.hg.1	NR_104656.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1600010637.hg.1	NR_104656.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1600010637.hg.1	NR_104656.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1600010637.hg.1	NR_104656.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1600010637.hg.1	NR_104656.1	Refseq
Affymetrix Human Clariom D Assay	PSR1600182017.hg.1	ENST00000613438.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1600182017.hg.1	ENST00000621378.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1600182017.hg.1	NR_104656.1	Refseq
Affymetrix Human Clariom D Assay	PSR1600182017.hg.1	ENST00000613438.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1600182017.hg.1	ENST00000621378.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1600182017.hg.1	NR_104656.1	Refseq
Affymetrix Human Clariom D Assay	PSR1600182017.hg.1	TC1600010637.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR1600182013.hg.1	ENST00000613438.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1600182013.hg.1	NR_104656.1	Refseq
Affymetrix Human Clariom D Assay	PSR1600182013.hg.1	ENST00000613438.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1600182013.hg.1	NR_104656.1	Refseq
Affymetrix Human Clariom D Assay	PSR1600182013.hg.1	TC1600010637.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR1600182011.hg.1	NR_104656.1	Refseq
Affymetrix Human Clariom D Assay	PSR1600182011.hg.1	NR_104656.1	Refseq
Affymetrix Human Clariom D Assay	PSR1600182011.hg.1	TC1600010637.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR1600182014.hg.1	ENST00000613438.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1600182014.hg.1	ENST00000621378.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1600182014.hg.1	NR_104656.1	Refseq
Affymetrix Human Clariom D Assay	PSR1600182014.hg.1	ENST00000613438.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1600182014.hg.1	ENST00000621378.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1600182014.hg.1	NR_104656.1	Refseq
Affymetrix Human Clariom D Assay	PSR1600182014.hg.1	TC1600010637.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR1600182019.hg.1	NR_104656.1	Refseq
Affymetrix Human Clariom D Assay	PSR1600182019.hg.1	NR_104656.1	Refseq
Affymetrix Human Clariom D Assay	PSR1600182019.hg.1	TC1600010637.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	TC1600010637.hg.1	ENST00000613438.1	Ensembl
Affymetrix Human Clariom D Assay	TC1600010637.hg.1	ENST00000613438.1	Ensembl
Affymetrix Human Clariom D Assay	TC1600010637.hg.1	ENST00000613438.1	Ensembl
Affymetrix Human Clariom D Assay	TC1600010637.hg.1	ENST00000613438.1	Ensembl
Affymetrix Human Clariom D Assay	TC1600010637.hg.1	ENST00000621378.1	Ensembl
Affymetrix Human Clariom D Assay	TC1600010637.hg.1	ENST00000621378.1	Ensembl
Affymetrix Human Clariom D Assay	TC1600010637.hg.1	ENST00000621378.1	Ensembl
Affymetrix Human Clariom D Assay	TC1600010637.hg.1	ENST00000621378.1	Ensembl
Affymetrix Human Clariom D Assay	TC1600010637.hg.1	ENST00000621378.1	Ensembl
Affymetrix Human Clariom D Assay	TC1600010637.hg.1	NR_104656.1	Refseq
Affymetrix Human Clariom D Assay	TC1600010637.hg.1	NR_104656.1	Refseq
Affymetrix Human Clariom D Assay	TC1600010637.hg.1	NR_104656.1	Refseq
Affymetrix Human Clariom D Assay	TC1600010637.hg.1	NR_104656.1	Refseq
Affymetrix Human Clariom D Assay	TC1600010637.hg.1	NR_104656.1	Refseq
Affymetrix Human Clariom D Assay	TC1600010637.hg.1	NR_104656.1	Refseq
Affymetrix Human Clariom D Assay	TC1600010637.hg.1	NR_104656.1	Refseq
Affymetrix Human Clariom D Assay	TC1600010637.hg.1	NR_104656.1	Refseq
Affymetrix Human Clariom D Assay	PSR1600182015.hg.1	ENST00000613438.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1600182015.hg.1	ENST00000621378.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1600182015.hg.1	NR_104656.1	Refseq
Affymetrix Human Clariom D Assay	PSR1600182015.hg.1	ENST00000613438.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1600182015.hg.1	ENST00000621378.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1600182015.hg.1	NR_104656.1	Refseq
Affymetrix Human Clariom D Assay	PSR1600182015.hg.1	TC1600010637.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR1600182018.hg.1	ENST00000621378.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1600182018.hg.1	NR_104656.1	Refseq
Affymetrix Human Clariom D Assay	PSR1600182018.hg.1	ENST00000621378.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1600182018.hg.1	NR_104656.1	Refseq
Affymetrix Human Clariom D Assay	PSR1600182018.hg.1	TC1600010637.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR1600182016.hg.1	ENST00000621378.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1600182016.hg.1	NR_104656.1	Refseq
Affymetrix Human Clariom D Assay	PSR1600182016.hg.1	ENST00000621378.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1600182016.hg.1	NR_104656.1	Refseq
Affymetrix Human Clariom D Assay	PSR1600182016.hg.1	TC1600010637.hg.1	Clariom D TC

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