Name: [Hs04407836_m1] [PDX1-AS1]
Creator: Thermo Fisher Scientific
Keywords: [PDX1-AS1] Assay, [PDX1 antisense RNA 1] Assay

Assay Details

Gene Symbol: PDX1-AS1
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NR_047484.1		1 - 2	241		58

Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Transcript Location	Amplicon Length
GenBankmRNA	BX383058.2	-	1 - 2	240		Chr. 13 - 27833923 - 27921404 [-] on Build GRCh38	58

Adjacent Gene Details

	Gene name	Gene Symbol	Alias	Distance	Relative Direction	Location Chromsome
Upstream	GS homeobox 1	GSX1	GSH1, Gsh-1	-54.1kb	Anti-sense	Chr. 13 - 27792643 - 27793952 on NCBI Build GRCh38
Downstream	ATP synthase, H+ transporting, mitochondrial F1 complex, epsilon subunit pseudogene 2	ATP5EP2		23.8kb	Anti-sense	Chr. 13 - 27945206 - 27945573 on NCBI Build GRCh38

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC1300008446.hg.1

Set Membership:

Amplicon length less than or equal to 70

Homo sapiens

Probe spans exons

MicroArray Probes:

Affymetrix

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	TC1300008446.hg.1	ENST00000499662.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1300008446.hg.1	ENST00000499662.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1300008446.hg.1	ENST00000499662.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1300008446.hg.1	NR_047484.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1300008446.hg.1	NR_047484.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1300008446.hg.1	NR_047484.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1300008446.hg.1	NR_047484.2	Refseq
Affymetrix Human Clariom D Assay	PSR1300156936.hg.1	ENST00000499662.2	Ensembl
Affymetrix Human Clariom D Assay	PSR1300156936.hg.1	NR_047484.2	Refseq
Affymetrix Human Clariom D Assay	PSR1300156936.hg.1	ENST00000499662.2	Ensembl
Affymetrix Human Clariom D Assay	PSR1300156936.hg.1	NR_047484.2	Refseq
Affymetrix Human Clariom D Assay	PSR1300156936.hg.1	TC1300008446.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR1300156934.hg.1	ENST00000499662.2	Ensembl
Affymetrix Human Clariom D Assay	PSR1300156934.hg.1	NR_047484.2	Refseq
Affymetrix Human Clariom D Assay	PSR1300156934.hg.1	ENST00000499662.2	Ensembl
Affymetrix Human Clariom D Assay	PSR1300156934.hg.1	NR_047484.2	Refseq
Affymetrix Human Clariom D Assay	PSR1300156934.hg.1	TC1300008446.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR1300156935.hg.1	ENST00000499662.2	Ensembl
Affymetrix Human Clariom D Assay	PSR1300156935.hg.1	NR_047484.2	Refseq
Affymetrix Human Clariom D Assay	PSR1300156935.hg.1	ENST00000499662.2	Ensembl
Affymetrix Human Clariom D Assay	PSR1300156935.hg.1	NR_047484.2	Refseq
Affymetrix Human Clariom D Assay	PSR1300156935.hg.1	TC1300008446.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	TC1300008446.hg.1	ENST00000499662.2	Ensembl
Affymetrix Human Clariom D Assay	TC1300008446.hg.1	ENST00000499662.2	Ensembl
Affymetrix Human Clariom D Assay	TC1300008446.hg.1	ENST00000499662.2	Ensembl
Affymetrix Human Clariom D Assay	TC1300008446.hg.1	NR_047484.2	Refseq
Affymetrix Human Clariom D Assay	TC1300008446.hg.1	NR_047484.2	Refseq
Affymetrix Human Clariom D Assay	TC1300008446.hg.1	NR_047484.2	Refseq
Affymetrix Human Clariom D Assay	TC1300008446.hg.1	NR_047484.2	Refseq

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Catalog #	4426961
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System Message

Genomic Map