Ascl3
Genomic Map
Back To TopAssay Details
| Gene Symbol: Ascl3 | ||||||
|---|---|---|---|---|---|---|
| Interrogated Sequence | Translated Protein | Exon Boundary | Assay Location | IMAGE Clone ID | Amplicon Length | |
| RefSeq | NM_020051.1 | NP_064435.1 | 1 - 2 | 52 | 65 | |
| GenBank mRNA | BC104346.1 | - | 1 - 2 | 47 | 40049496 | 65 |
| BC104347.1 | - | 1 - 2 | 46 | 40049502 | 65 | |
Back To TopMore Information
Updated Mapping Information
This assay targets the same location as MTA transcript cluster(s) TC0700004079.mm.1Additional Information:
This assay is in the 5'UTR region of the BC104346.1,BC104347.1,NM_020051.1 transcripts.
Set Membership: |
Ambion siRNA available
Amplicon length less than or equal to 70
3' Most
Mammalian Gene Collection
Mus musculus
1700
Inventoried
Probe spans exons
|
Matching Ambion siRNAs:
Panther Classification:
Gene Ontology Categories:
Function(s)
Process(es)
negative regulation of transcription from RNA polymerase II promoter
transcription, DNA-templated
regulation of transcription, DNA-templated
regulation of transcription from RNA polymerase II promoter
transcription from RNA polymerase II promoter
RNA polymerase II regulatory region sequence-specific DNA binding
transcriptional repressor activity, RNA polymerase II transcription regulatory region sequence-specific binding
DNA binding
protein binding
protein dimerization activity
negative regulation of transcription from RNA polymerase II promoter
transcription, DNA-templated
regulation of transcription, DNA-templated
regulation of transcription from RNA polymerase II promoter
transcription from RNA polymerase II promoter
RNA polymerase II regulatory region sequence-specific DNA binding
transcriptional repressor activity, RNA polymerase II transcription regulatory region sequence-specific binding
DNA binding
protein binding
protein dimerization activity
MicroArray Probes:
Agilent
Affymetrix
ABI
Illumina
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| Agilent Whole Mouse Genome Microarray 4x44K v2 | A_55_P2185553 | NM_020051.1 | mouse_transcriptome |
| Agilent Whole Mouse Genome Microarray 4x44K v2 | A_55_P2185553 | AB046448.1 | mouse_transcriptome |
| Agilent Whole Mouse Genome Microarray 4x44K v2 | A_55_P2185553 | AJ277605.1 | mouse_transcriptome |
| Agilent SurePrint G3 Mouse CGH Microarray 1x1M | 892623 | - | - |
| Agilent SurePrint G3 Mouse CGH Microarray 1x1M | 516454 | - | - |
| Agilent SurePrint G3 Mouse CGH Microarray 1x1M | 299144 | - | - |
| Agilent Mouse Genome CGH Microarray 44K G4426B | A_53_P137531 | - | - |
| SurePrint G3 Mouse Gene Expression Microarray G4852A | A_55_P2185553 | NM_020051.1 | mouse_transcriptome |
| SurePrint G3 Mouse Gene Expression Microarray G4852A | A_55_P2185553 | AB046448.1 | mouse_transcriptome |
| SurePrint G3 Mouse Gene Expression Microarray G4852A | A_55_P2185553 | AJ277605.1 | mouse_transcriptome |
| Agilent Genotypic Technology designed "Custom Agilent Mus Musculus 8x15k GE Microarray (AMADID-016270) " | A_51_P237317 | NM_020051.1 | mouse_transcriptome |
| Agilent Mouse Promoter ChIP-on-Chip A) | A_68_P25409725 | - | - |
| Agilent Mouse Promoter ChIP-on-Chip A) | A_68_P25409694 | - | - |
| Agilent Mouse Promoter ChIP-on-Chip A) | A_68_P25409706 | - | - |
| Agilent Mouse Promoter ChIP-on-Chip A) | A_68_P25409719 | - | - |
| Agilent Mouse Promoter ChIP-on-Chip A) | A_68_P25409702 | - | - |
| Agilent Mouse Promoter ChIP-on-Chip A) | A_68_P25409697 | - | - |
| Agilent Mouse Promoter ChIP-on-Chip A) | A_68_P25409727 | - | - |
| Agilent Mouse Promoter ChIP-on-Chip A) | A_68_P25409723 | - | - |
| Agilent Mouse Promoter ChIP-on-Chip A) | A_68_P25409713 | - | - |
| Agilent Mouse Promoter ChIP-on-Chip A) | A_68_P25409710 | - | - |
| Agilent Mouse Promoter ChIP-on-Chip A) | A_68_P25409726 | - | - |
| Agilent Mouse Promoter ChIP-on-Chip A) | A_68_P25409695 | - | - |
| Agilent Mouse Promoter ChIP-on-Chip A) | A_68_P25409722 | - | - |
| Agilent Mouse Promoter ChIP-on-Chip A) | A_68_P25409707 | - | - |
| Agilent Mouse Promoter ChIP-on-Chip A) | A_68_P25409720 | - | - |
| Agilent Mouse Promoter ChIP-on-Chip A) | A_68_P25409698 | - | - |
| Agilent Mouse Promoter ChIP-on-Chip A) | A_68_P25409704 | - | - |
| Agilent Mouse Promoter ChIP-on-Chip A) | A_68_P25409717 | - | - |
| Agilent Mouse Promoter ChIP-on-Chip A) | A_68_P25409692 | - | - |
| Agilent Mouse Promoter ChIP-on-Chip A) | A_68_P25409715 | - | - |
| Agilent Mouse Promoter ChIP-on-Chip A) | A_68_P25409705 | - | - |
| Agilent Mouse Promoter ChIP-on-Chip A) | A_68_P25409716 | - | - |
| Agilent Mouse Promoter ChIP-on-Chip A) | A_68_P25409721 | - | - |
| Agilent Mouse Promoter ChIP-on-Chip A) | A_68_P25409696 | - | - |
| Agilent Mouse Promoter ChIP-on-Chip A) | A_68_P25409700 | - | - |
| Agilent Mouse Genome CGH Microarray 244A (G4415A) | A_53_P137531 | - | - |
| Whole Mouse Genome G4122A | A_52_P460800 | NM_020051.1 | mouse_transcriptome |
| Whole Mouse Genome G4122A | A_52_P460800 | AB046448.1 | mouse_transcriptome |
| Whole Mouse Genome G4122A | A_52_P460800 | AB221543.1 | mouse_transcriptome |
| Whole Mouse Genome G4122A | A_52_P460800 | AJ277605.1 | mouse_transcriptome |
| Whole Mouse Genome G4122A | A_52_P460800 | BC104346.1 | mouse_transcriptome |
| Whole Mouse Genome G4122A | A_51_P237317 | NM_020051.1 | mouse_transcriptome |
| Agilent Mouse Developmental Microarray 44K G2519A Option 002 | A_66_P110118 | - | - |
| Agilent Mouse Genome CGH Microarray 105A (G4416A) | A_53_P137531 | - | - |
| Agilent Mouse Proximal Promoter ChIP-on-Chip A) | A_68_P06630095 | - | - |
| Agilent Mouse Proximal Promoter ChIP-on-Chip A) | A_68_P06630100 | - | - |
| Agilent Mouse Proximal Promoter ChIP-on-Chip A) | A_68_P06630093 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P25409725 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P25409705 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P25409646 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P25409671 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P25409704 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P25409653 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P25409682 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P25409685 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P25409664 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P25409683 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P25409680 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P25409715 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P25409710 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P25409688 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P25409674 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P25409692 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P25409729 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P25409669 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P25409720 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P25409652 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P25409696 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P25409656 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P25409716 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P25409698 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P25409667 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P25409673 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P25409713 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P25409662 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P25409707 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P25409721 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P25409694 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P25409661 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P25409687 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P25409677 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P25409726 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P25409672 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P25409647 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P25409701 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P25409675 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P25409717 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P25409689 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P25409719 | - | - |
| Agilent Six_ChIP_02_of_03_v2 | A_68_P25409697 | - | - |
| Agilent Six_ChIP_02_of_03_v2 | A_68_P25409713 | - | - |
| Agilent Six_ChIP_02_of_03_v2 | A_68_P06539591 | - | - |
| Agilent Six_ChIP_02_of_03_v2 | A_68_P25409707 | - | - |
| Agilent Six_ChIP_02_of_03_v2 | A_68_P25409715 | - | - |
| Agilent Six_ChIP_02_of_03_v2 | A_68_P25409729 | - | - |
| Agilent Six_ChIP_02_of_03_v2 | A_68_P06420310 | - | - |
| Agilent Six_ChIP_02_of_03_v2 | A_68_P06559805 | - | - |
| Agilent Six_ChIP_02_of_03_v2 | A_68_P25409711 | - | - |
| Agilent Six_ChIP_02_of_03_v2 | A_68_P25409728 | - | - |
| Agilent Six_ChIP_02_of_03_v2 | A_68_P25409726 | - | - |
| Agilent Six_ChIP_02_of_03_v2 | A_68_P06365122 | - | - |
| Agilent Six_ChIP_02_of_03_v2 | A_68_P05954549 | - | - |
| Agilent Six_ChIP_02_of_03_v2 | A_68_P25409720 | - | - |
| Agilent Six_ChIP_02_of_03_v2 | A_68_P06365124 | - | - |
| Agilent Six_ChIP_02_of_03_v2 | A_68_P25409719 | - | - |
| Agilent Six_ChIP_02_of_03_v2 | A_68_P25409701 | - | - |
| Agilent Six_ChIP_02_of_03_v2 | A_68_P25409696 | - | - |
| Agilent Six_ChIP_02_of_03_v2 | A_68_P25409727 | - | - |
| Agilent Six_ChIP_02_of_03_v2 | A_68_P25409704 | - | - |
| Agilent Six_ChIP_02_of_03_v2 | A_68_P25409698 | - | - |
| Agilent Six_ChIP_02_of_03_v2 | A_68_P25409721 | - | - |
| Agilent Six_ChIP_02_of_03_v2 | A_68_P25409723 | - | - |
| Agilent Six_ChIP_02_of_03_v2 | A_68_P25409722 | - | - |
| Agilent Six_ChIP_02_of_03_v2 | A_68_P25409717 | - | - |
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| Affymetrix Mouse Gene 1.0 ST Array | 10566802 | - | - |
| Affymetrix Mouse Gene 1.0 ST Array | 10566803 | - | - |
| Affymetrix Mouse Gene 1.0 ST Array | 10566801 | - | - |
| Affymetrix HT MG-430 PM Array Plate | 1420780_PM_at | - | - |
| Affymetrix Mouse Gene 1.1 ST Array | 10566800 | - | - |
| Mouse Genome 430 2.0 Array | 1420780_at | - | - |
| Mouse Genome 430 2.0 Array | 1420780_PM_at | - | - |
| Affymetrix GeneChip Mouse Genome 430 2.0 Array | 56787_at | - | - |
| Affymetrix GeneChip Mouse Genome 430 2.0 Array | 56787_PM_at | - | - |
| Affymetrix Mouse Clariom S Array | PSR0700033697.mm.1 | NM_020051.1.1 | Refseq |
| Affymetrix Mouse Clariom S Array | PSR0700033697.mm.1 | NM_020051.1 | Refseq |
| Affymetrix Mouse Clariom S Array | PSR0700033697.mm.1 | TC0700004079.mm.1 | MTA TC |
| Affymetrix Mouse Clariom S Array | PSR0700033695.mm.1 | NM_020051.1.1 | Refseq |
| Affymetrix Mouse Clariom S Array | PSR0700033695.mm.1 | NM_020051.1 | Refseq |
| Affymetrix Mouse Clariom S Array | PSR0700033695.mm.1 | TC0700004079.mm.1 | MTA TC |
| Affymetrix Mouse Clariom S Array | PSR0700033696.mm.1 | NM_020051.1.1 | Refseq |
| Affymetrix Mouse Clariom S Array | PSR0700033696.mm.1 | NM_020051.1 | Refseq |
| Affymetrix Mouse Clariom S Array | PSR0700033696.mm.1 | TC0700004079.mm.1 | MTA TC |
| Mouse Expression Set 430 | 1420780_PM_at | - | - |
| Mouse Expression Set 430 | 1420780_at | - | - |
| Mouse Genome 430A 2.0 Array | 1420780_at | - | - |
| Mouse Genome 430A 2.0 Array | 1420780_PM_at | - | - |
| Affymetrix HT Mouse Genome 430A Array | 1420780_at | - | - |
| Affymetrix HT Mouse Genome 430A Array | 1420780_PM_at | - | - |
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| ABI Mouse Genome Survey Microarray | 371128 | - | - |
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| MouseWG-6 v2 Expression BeadChip | 4570484 | - | - |
| Illumina mouse-6 v1.0 expression beadchip | 4570484 | - | - |
| Illumina mouseRef-8 v1.0 expression beadchip | 0004570484 | - | - |
| Illumina mouseRef-8 v1.1 expression beadchip | ILMN_2691996 | - | - |
| Illumina mouse-6 v1.1 expression beadchip | ILMN_2691996 | - | - |
| mouse-6 v1.1 (Illumina) | scl30831.2.1_250-S | - | - |
| Illumina Sentrix mouse-6.v1 bead array | 4570484 | - | - |
| Illumina Sentrix MouseRef-8 Expression BeadChip | scl30831.2.1_250-S | - | - |
| Illumina Sentrix Mouse-6 Expression BeadChip (2) | 4570484 | - | - |
| MouseRef-8 v2 Expression BeadChip | ILMN_2691996 | - | - |
| Illumina MouseWG-6 v2.0 expression beadchip | ILMN_2691996 | - | - |
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