Tsix
Genomic Map
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| Gene Symbol: Tsix | |||||||
|---|---|---|---|---|---|---|---|
| Interrogated Sequence | Translated Protein | RNADB ID | Exon Boundary | Assay Location | IMAGE Clone ID | Amplicon Length | |
| RefSeq | NR_002844.2 | 4 | 2564 | 69 | |||
| GenBank mRNA | AF138745.1 | - | LIT1604 Tsix |
4 | 2559 | 69 | |
| Interrogated Sequence | Translated Protein | Exon Boundary | Assay Location | IMAGE Clone ID | Transcript Location | Amplicon Length | |
|---|---|---|---|---|---|---|---|
| GenBankmRNA | AJ421479.1 | - | Chr. - - [-] on Build | 69 | |||
Adjacent Gene Details
| Gene name | Gene Symbol | Alias | Distance | Relative Direction | Location Chromsome | |
|---|---|---|---|---|---|---|
| Upstream | testis specific X-linked gene | Tsx | AV207184 | -56.7kb | Sense | Chr. X - 103409101 - 103424588 on NCBI Build GRCm38 |
| Downstream |
Jpx transcript, Xist activator (non-protein coding) |
Jpx |
2010000I03Rik, 2510040I06Rik, Enox |
8.6kb | Sense | Chr. X - 103493576 - 103506425 on NCBI Build GRCm38 |
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Additional Information:
Based on assay re-evaluation, this assay may detect genomic DNA. Please contact Tech Support if you need more information.
Set Membership: |
Amplicon length less than or equal to 70
3' Most
Detect Genomic DNA
Mus musculus
Both primers and probe map within a single exon
|
Gene Ontology Categories:
MicroArray Probes:
Agilent
Affymetrix
Illumina
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| Agilent Whole Mouse Genome Microarray 4x44K v2 | A_55_P2153116 | AF138745.1 | mouse_transcriptome |
| Agilent SurePrint G3 Mouse CGH Microarray 1x1M | 21422 | - | - |
| Agilent SurePrint G3 Mouse CGH Microarray 1x1M | 940662 | - | - |
| Agilent SurePrint G3 Mouse CGH Microarray 1x1M | 348689 | - | - |
| Agilent SurePrint G3 Mouse CGH Microarray 1x1M | 19989 | - | - |
| Agilent SurePrint G3 Mouse CGH Microarray 1x1M | 393052 | - | - |
| Agilent SurePrint G3 Mouse CGH Microarray 1x1M | 777265 | - | - |
| Agilent SurePrint G3 Mouse CGH Microarray 1x1M | 603496 | - | - |
| Agilent SurePrint G3 Mouse CGH Microarray 1x1M | 565861 | - | - |
| Agilent SurePrint G3 Mouse CGH Microarray 1x1M | 59552 | - | - |
| Agilent SurePrint G3 Mouse CGH Microarray 1x1M | 281417 | - | - |
| Agilent SurePrint G3 Mouse CGH Microarray 1x1M | 301114 | - | - |
| Agilent SurePrint G3 Mouse CGH Microarray 1x1M | 198548 | - | - |
| Agilent SurePrint G3 Mouse CGH Microarray 1x1M | 93804 | - | - |
| Agilent SurePrint G3 Mouse CGH Microarray 1x1M | 241942 | - | - |
| Agilent SurePrint G3 Mouse CGH Microarray 1x1M | 907929 | - | - |
| Agilent SurePrint G3 Mouse CGH Microarray 1x1M | 679577 | - | - |
| Agilent SurePrint G3 Mouse CGH Microarray 1x1M | 381038 | - | - |
| Agilent SurePrint G3 Mouse CGH Microarray 1x1M | 752059 | - | - |
| Agilent SurePrint G3 Mouse CGH Microarray 1x1M | 930631 | - | - |
| Agilent SurePrint G3 Mouse CGH Microarray 1x1M | 401085 | - | - |
| Agilent SurePrint G3 Mouse CGH Microarray 1x1M | 22408 | - | - |
| Agilent SurePrint G3 Mouse CGH Microarray 1x1M | 796040 | - | - |
| Agilent SurePrint G3 Mouse CGH Microarray 1x1M | 596996 | - | - |
| Agilent SurePrint G3 Mouse CGH Microarray 1x1M | 615356 | - | - |
| Agilent SurePrint G3 Mouse CGH Microarray 1x1M | 319212 | - | - |
| Agilent SurePrint G3 Mouse CGH Microarray 1x1M | 824458 | - | - |
| Agilent SurePrint G3 Mouse CGH Microarray 1x1M | 453585 | AK047974.1 | genbank_mrna_mouse |
| Agilent SurePrint G3 Mouse CGH Microarray 1x1M | 453585 | M30514.1 | genbank_mrna_mouse |
| Agilent SurePrint G3 Mouse CGH Microarray 1x1M | 453585 | NM_009604.3 | refseq_mrna_mouse_NM |
| Agilent SurePrint G3 Mouse CGH Microarray 1x1M | 453585 | X03818.1 | genbank_mrna_mouse |
| Agilent SurePrint G3 Mouse CGH Microarray 1x1M | 924765 | - | - |
| Agilent SurePrint G3 Mouse CGH Microarray 1x1M | 151297 | - | - |
| Agilent SurePrint G3 Mouse CGH Microarray 1x1M | 218687 | - | - |
| Agilent SurePrint G3 Mouse CGH Microarray 1x1M | 679202 | - | - |
| Agilent SurePrint G3 Mouse CGH Microarray 1x1M | 923259 | AF319547.1 | genbank_mrna_mouse |
| Agilent SurePrint G3 Mouse CGH Microarray 1x1M | 923259 | AK010484.1 | genbank_mrna_mouse |
| Agilent SurePrint G3 Mouse CGH Microarray 1x1M | 923259 | AK028274.1 | genbank_mrna_mouse |
| Agilent SurePrint G3 Mouse CGH Microarray 1x1M | 923259 | AK031534.1 | genbank_mrna_mouse |
| Agilent SurePrint G3 Mouse CGH Microarray 1x1M | 923259 | AK031679.1 | genbank_mrna_mouse |
| Agilent SurePrint G3 Mouse CGH Microarray 1x1M | 923259 | AK147715.1 | genbank_mrna_mouse |
| Agilent SurePrint G3 Mouse CGH Microarray 1x1M | 923259 | AK152989.1 | genbank_mrna_mouse |
| Agilent SurePrint G3 Mouse CGH Microarray 1x1M | 923259 | AK155138.1 | genbank_mrna_mouse |
| Agilent SurePrint G3 Mouse CGH Microarray 1x1M | 923259 | AK167603.1 | genbank_mrna_mouse |
| Agilent SurePrint G3 Mouse CGH Microarray 1x1M | 923259 | AK168455.1 | genbank_mrna_mouse |
| Agilent SurePrint G3 Mouse CGH Microarray 1x1M | 923259 | AK169255.1 | genbank_mrna_mouse |
| Agilent SurePrint G3 Mouse CGH Microarray 1x1M | 923259 | AK170967.1 | genbank_mrna_mouse |
| Agilent SurePrint G3 Mouse CGH Microarray 1x1M | 923259 | BC021900.1 | genbank_mrna_mouse |
| Agilent SurePrint G3 Mouse CGH Microarray 1x1M | 923259 | BC043699.1 | genbank_mrna_mouse |
| Agilent SurePrint G3 Mouse CGH Microarray 1x1M | 923259 | BC055026.1 | genbank_mrna_mouse |
| Agilent SurePrint G3 Mouse CGH Microarray 1x1M | 923259 | BC062920.1 | genbank_mrna_mouse |
| Agilent SurePrint G3 Mouse CGH Microarray 1x1M | 923259 | BC071251.1 | genbank_mrna_mouse |
| Agilent SurePrint G3 Mouse CGH Microarray 1x1M | 923259 | NM_028041.2 | refseq_mrna_mouse_NM |
| Agilent SurePrint G3 Mouse CGH Microarray 1x1M | 290563 | - | - |
| Agilent SurePrint G3 Mouse CGH Microarray 4x180K | 26145 | - | - |
| Agilent SurePrint G3 Mouse CGH Microarray 4x180K | 17964 | - | - |
| Agilent SurePrint G3 Mouse CGH Microarray 4x180K | 82221 | - | - |
| Agilent SurePrint G3 Mouse CGH Microarray 4x180K | 88933 | - | - |
| Agilent SurePrint G3 Mouse CGH Microarray 4x180K | 138497 | - | - |
| Agilent SurePrint G3 Mouse CGH Microarray 4x180K | 116573 | - | - |
| Agilent Mouse Genome CGH Microarray 44K G4426B | A_53_P177061 | - | - |
| Agilent Mouse Genome CGH Microarray 44K G4426B | A_53_P147879 | - | - |
| Agilent Mouse Genome CGH Microarray 244A (G4415A) | A_67_P09380211 | - | - |
| Agilent Mouse Genome CGH Microarray 244A (G4415A) | A_67_P09380119 | - | - |
| Agilent Mouse Genome CGH Microarray 244A (G4415A) | A_67_P09380179 | - | - |
| Agilent Mouse Genome CGH Microarray 244A (G4415A) | A_53_P147879 | - | - |
| Agilent Mouse Genome CGH Microarray 244A (G4415A) | A_67_P03729505 | - | - |
| Agilent Mouse Genome CGH Microarray 244A (G4415A) | A_67_P09380080 | - | - |
| Agilent Mouse Genome CGH Microarray 244A (G4415A) | A_53_P177061 | - | - |
| Whole Mouse Genome G4122A | A_52_P245806 | L04961.1 | mouse_transcriptome |
| Whole Mouse Genome G4122A | A_52_P245806 | NR_001463.3 | mouse_transcriptome |
| Whole Mouse Genome G4122A | A_52_P245806 | NR_001570.2 | mouse_transcriptome |
| Whole Mouse Genome G4122A | A_52_P245806 | AK039861.1 | mouse_transcriptome |
| Whole Mouse Genome G4122A | A_52_P245806 | NR_002844.2 | mouse_transcriptome |
| Agilent Mouse Genome CGH Microarray 105A (G4416A) | A_67_P03729505 | - | - |
| Agilent Mouse Genome CGH Microarray 105A (G4416A) | A_67_P09380080 | - | - |
| Agilent Mouse Genome CGH Microarray 105A (G4416A) | A_53_P177061 | - | - |
| Agilent Mouse Genome CGH Microarray 105A (G4416A) | A_53_P147879 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P32572877 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P32572840 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P32572884 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P32572834 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P14770008 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P32572875 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P32572843 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P14513324 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P32572878 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P32572830 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P32572833 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P14860037 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P32572874 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P14770007 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P32572879 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P32572839 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P14598430 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P32572828 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P32572883 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P32572832 | - | - |
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| Affymetrix HT MG-430 PM Array Plate | 1427596_PM_at | - | - |
| Mouse Genome 430 2.0 Array | 1427596_at | - | - |
| Mouse Genome 430 2.0 Array | 1427596_PM_at | - | - |
| Affymetrix GeneChip Mouse Genome 430 2.0 Array | 22097_PM_at | - | - |
| Affymetrix GeneChip Mouse Genome 430 2.0 Array | 22097_at | - | - |
| Affymetrix Mouse Clariom S Array | PSR0X00006877.mm.1 | NR_002844.2.1 | Refseq |
| Affymetrix Mouse Clariom S Array | PSR0X00006877.mm.1 | NR_002844.2 | Refseq |
| Affymetrix Mouse Clariom S Array | PSR0X00006877.mm.1 | TC0X00003398.mm.1 | MTA TC |
| Mouse Expression Set 430 | 1427596_at | - | - |
| Mouse Expression Set 430 | 1427596_PM_at | - | - |
| Mouse Genome 430A 2.0 Array | 1427596_at | - | - |
| Mouse Genome 430A 2.0 Array | 1427596_PM_at | - | - |
| Affymetrix HT Mouse Genome 430A Array | 1427596_at | - | - |
| Affymetrix HT Mouse Genome 430A Array | 1427596_PM_at | - | - |
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| MouseWG-6 v2 Expression BeadChip | 100730026 | - | - |
| Illumina mouse-6 v1.1 expression beadchip | ILMN_1256650 | - | - |
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