Name: [Mm01319749_m1] [6530411M01Rik]
Creator: Thermo Fisher Scientific
Keywords: [6530411M01Rik] Assay, [RIKEN cDNA 6530411M01 gene] Assay

Assay Details

Gene Symbol: 6530411M01Rik
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NR_027881.1		2 - 3	867		92
GenBank mRNA	AK078247.1	-	2 - 3	682		92

Adjacent Gene Details

	Gene name	Gene Symbol	Alias	Distance	Relative Direction	Location Chromsome
Upstream	RIKEN cDNA 1700010I14 gene	1700010I14Rik		-139.4kb	Anti-sense	Chr. 17 - 8988320 - 9008319 on NCBI Build GRCm38
Downstream	poly(A) binding protein, cytoplasmic 6	Pabpc6	4932702K14Rik, AI428050, Pabpc3	517.3kb	Sense	Chr. 17 - 9666497 - 9669704 on NCBI Build GRCm38

More Information

Updated Mapping Information

This assay targets the same location as MTA transcript cluster(s) TC1700001417.mm.1

Set Membership:

Amplicon length between 86 and 100

3' Most

Mus musculus

1700

Probe spans exons

MicroArray Probes:

Agilent Affymetrix ABI Illumina

Array Name	Probe IDs	Targets	Target Type
Agilent Whole Mouse Genome Microarray 4x44K v2	A_52_P325555	AK020377.1	mouse_transcriptome
Agilent Whole Mouse Genome Microarray 4x44K v2	A_52_P325555	AK035915.1	mouse_transcriptome
Agilent Whole Mouse Genome Microarray 4x44K v2	A_52_P325555	NR_027881.1	mouse_transcriptome
Agilent Whole Mouse Genome Microarray 4x44K v2	A_52_P325555	AK078247.1	mouse_transcriptome
Agilent Whole Mouse Genome Microarray 4x44K v2	A_52_P325555	BY721399.1	mouse_transcriptome
Agilent Whole Mouse Genome Microarray 4x44K v2	A_52_P325555	AK020377.1	mouse_transcriptome
Agilent Whole Mouse Genome Microarray 4x44K v2	A_52_P325555	AK035915.1	mouse_transcriptome
Agilent Whole Mouse Genome Microarray 4x44K v2	A_52_P325555	NR_027881.1	mouse_transcriptome
Agilent Whole Mouse Genome Microarray 4x44K v2	A_52_P325555	AK078247.1	mouse_transcriptome
Agilent Whole Mouse Genome Microarray 4x44K v2	A_52_P325555	BY721399.1	mouse_transcriptome
Agilent SurePrint G3 Mouse CGH Microarray 1x1M	212494	-	-
Agilent SurePrint G3 Mouse CGH Microarray 1x1M	446358	-	-
Agilent SurePrint G3 Mouse CGH Microarray 1x1M	274192	-	-
Agilent SurePrint G3 Mouse CGH Microarray 1x1M	585800	-	-
Agilent SurePrint G3 Mouse CGH Microarray 1x1M	115516	-	-
Agilent SurePrint G3 Mouse CGH Microarray 1x1M	370203	-	-
Agilent SurePrint G3 Mouse CGH Microarray 1x1M	864371	AK049730.1	genbank_mrna_mouse
Agilent SurePrint G3 Mouse CGH Microarray 1x1M	140500	-	-
Agilent SurePrint G3 Mouse CGH Microarray 1x1M	554928	-	-
Agilent SurePrint G3 Mouse CGH Microarray 1x1M	769342	-	-
Agilent SurePrint G3 Mouse CGH Microarray 1x1M	271241	-	-
Agilent SurePrint G3 Mouse CGH Microarray 1x1M	403031	-	-
Agilent SurePrint G3 Mouse CGH Microarray 4x180K	64897	-	-
Agilent SurePrint G3 Mouse CGH Microarray 4x180K	152414	-	-
Agilent Mouse Genome CGH Microarray 44K G4426B	A_53_P179652	-	-
Agilent Mouse Genome CGH Microarray 44K G4426B	A_53_P105845	-	-
Agilent Mouse Genome CGH Microarray 244A (G4415A)	A_53_P179652	-	-
Agilent Mouse Genome CGH Microarray 244A (G4415A)	A_53_P105845	-	-
Whole Mouse Genome G4122A	A_52_P325555	AK020377.1	mouse_transcriptome
Whole Mouse Genome G4122A	A_52_P325555	AK035915.1	mouse_transcriptome
Whole Mouse Genome G4122A	A_52_P325555	NR_027881.1	mouse_transcriptome
Whole Mouse Genome G4122A	A_52_P325555	AK078247.1	mouse_transcriptome
Whole Mouse Genome G4122A	A_52_P325555	BY721399.1	mouse_transcriptome
Whole Mouse Genome G4122A	A_52_P325555	AK020377.1	mouse_transcriptome
Whole Mouse Genome G4122A	A_52_P325555	AK035915.1	mouse_transcriptome
Whole Mouse Genome G4122A	A_52_P325555	NR_027881.1	mouse_transcriptome
Whole Mouse Genome G4122A	A_52_P325555	AK078247.1	mouse_transcriptome
Whole Mouse Genome G4122A	A_52_P325555	BY721399.1	mouse_transcriptome
Agilent Mouse Genome CGH Microarray 105A (G4416A)	A_53_P179652	-	-
Agilent Mouse Genome CGH Microarray 105A (G4416A)	A_53_P105845	-	-

Array Name	Probe IDs	Targets	Target Type
Affymetrix Mouse Gene 1.0 ST Array	10447698	-	-
Affymetrix HT MG-430 PM Array Plate	1453642_PM_at	-	-
Affymetrix Mouse Gene 1.1 ST Array	10447697	-	-
Mouse Genome 430 2.0 Array	1453642_at	-	-
Mouse Genome 430 2.0 Array	1453642_PM_at	-	-
Affymetrix Mouse Clariom S Array	PSR1700012723.mm.1	NR_027881.1.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1700012723.mm.1	NR_027881.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1700012723.mm.1	TC1700001417.mm.1	MTA TC
Mouse Expression Set 430	1453642_at	-	-
Mouse Expression Set 430	1453642_PM_at	-	-
Affymetrix HT Mouse Genome 430B Array	1453642_at	-	-
Affymetrix HT Mouse Genome 430B Array	1453642_PM_at	-	-

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System Message

Genomic Map