Name: [Mm03456292_m1] [Gt(ROSA)26Sor]
Creator: Thermo Fisher Scientific
Keywords: [Gt(ROSA)26Sor] Assay, [gene trap ROSA 26, Philippe Soriano] Assay

Assay Details

Gene Symbol: Gt(ROSA)26Sor
Interrogated Sequence		Translated Protein	RNADB ID	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NR_027008.1			1 - 2	177		55
GenBank mRNA	U83174.1	-	LIT3416 Rosa26.1	1 - 2	130		55
GenBank mRNA	U83175.1	-	LIT3417 Rosa26.2	1 - 2	110		55

Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	Transcript Location	Amplicon Length
GenBankmRNA	CJ048065.1	-	1 - 2	115	Chr. 6 - 113071136 - 113077181 [-] on Build GRCm38	55
GenBankmRNA	BE944913.1	-	1 - 2	52	Chr. 6 - 113071062 - 113077119 [-] on Build GRCm38	55
GenBankmRNA	CJ094069.1	-	1 - 2	105	Chr. 6 - 113071070 - 113077170 [-] on Build GRCm38	55
GenBankmRNA	CK616335.1	-	1 - 2	35	Chr. 6 - 113070874 - 113077102 [-] on Build GRCm38	55

Adjacent Gene Details

	Gene name	Gene Symbol	Alias	Distance	Relative Direction	Location Chromsome
Upstream	THUMP domain containing 3	Thumpd3	AW556087, Gt(ROSA)26asSor, Gtrosa26as	-2.1kb	Anti-sense	Chr. 6 - 113046252 - 113068278 on NCBI Build GRCm38
Downstream	SET domain containing 5	Setd5	2900045N06Rik, C330007C20, C85544, mKIAA1757	427.0	Anti-sense	Chr. 6 - 113077624 - 113153426 on NCBI Build GRCm38

More Information

Updated Mapping Information

This assay targets the same location as MTA transcript cluster(s) TC0600002911.mm.1

Set Membership:

Amplicon length less than or equal to 70

3' Most

Mus musculus

1700

Probe spans exons

MicroArray Probes:

Affymetrix ABI

Array Name	Probe IDs	Targets	Target Type
Affymetrix Mouse Clariom S Array	PSR0600022326.mm.1	TC0600002911.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR0600022326.mm.1	NR_027008.1.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0600022326.mm.1	NR_027008.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0600022326.mm.1	NR_027009.1.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0600022326.mm.1	NR_027009.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0600022328.mm.1	TC0600002911.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR0600022328.mm.1	NR_027008.1.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0600022328.mm.1	NR_027008.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0600022328.mm.1	NR_027009.1.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0600022328.mm.1	NR_027009.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0600022328.mm.1	NR_027010.1.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0600022328.mm.1	NR_027010.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0600022330.mm.1	TC0600002911.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR0600022330.mm.1	NR_027008.1.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0600022330.mm.1	NR_027008.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0600022327.mm.1	TC0600002911.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR0600022327.mm.1	NR_027008.1.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0600022327.mm.1	NR_027008.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0600022327.mm.1	NR_027009.1.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0600022327.mm.1	NR_027009.1	Refseq

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System Message

Genomic Map