Name: [Mm03682091_m1] [Pknox1]
Creator: Thermo Fisher Scientific
Keywords: [Pknox1] Assay, [Pbx/knotted 1 homeobox] Assay

Assay Details

Gene Symbol: Pknox1
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NR_027493.1		1 - 2	123		75

Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Transcript Location	Amplicon Length
GenBankmRNA	BF320181.1	-	1 - 2	80		Chr. 17 - 31564816 - 31583805 [+] on Build GRCm38	75

Adjacent Gene Details

	Gene name	Gene Symbol	Alias	Distance	Relative Direction	Location Chromsome
Upstream	NADH dehydrogenase (ubiquinone) flavoprotein 3	Ndufv3	1500032D16Rik	-33.4kb	Sense	Chr. 17 - 31520115 - 31531326 on NCBI Build GRCm38
Downstream	cystathionine beta-synthase	Cbs	AI047524, AI303044, HIP4	30.6kb	Anti-sense	Chr. 17 - 31612623 - 31637233 on NCBI Build GRCm38

This assay targets the same location as MTA transcript cluster(s) TC1700000541.mm.1

Amplicon length between 71 and 85

Mus musculus

Probe spans exons

Function(s) Process(es)

Affymetrix

Array Name	Probe IDs	Targets	Target Type
Affymetrix Mouse Clariom S Array	PSR1700004946.mm.1	NM_016670.3.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1700004946.mm.1	NM_016670.3	Refseq
Affymetrix Mouse Clariom S Array	PSR1700004946.mm.1	NR_027493.1.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1700004946.mm.1	NR_027493.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1700004946.mm.1	TC1700000541.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR1700004947.mm.1	NM_016670.3.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1700004947.mm.1	NM_016670.3	Refseq
Affymetrix Mouse Clariom S Array	PSR1700004947.mm.1	NR_027493.1.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1700004947.mm.1	NR_027493.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1700004947.mm.1	TC1700000541.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR1700004948.mm.1	NR_027493.1.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1700004948.mm.1	NR_027493.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1700004948.mm.1	TC1700000541.mm.1	MTA TC