Assay Details

Gene Symbol: Deptor
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001037937.3	NP_001033026.1	9	6871		96
RefSeq	NM_145470.3	NP_663445.2	9	7049		96
GenBank mRNA	AK014624.1	-	1	651		96
	AK171902.1	-		2815		96
	AK172487.1	-	1	2225		96

Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	Transcript Location	Amplicon Length
GenBankmRNA	CR757092.1	-	1	213	Chr. 15 - 55257561 - 55257877 [+] on Build GRCm38	96
GenBankmRNA	AW109662.1	-	1	188	Chr. 15 - 55257609 - 55257958 [+] on Build GRCm38	96
GenBankmRNA	BQ551013.1	-	1	560	Chr. 15 - 55257211 - 55257842 [+] on Build GRCm38	96
GenBankmRNA	BI696090.1	-		161	Chr. - - [-] on Build	96
GenBankmRNA	BI557184.1	-	1	202	Chr. 15 - 55257584 - 55258300 [+] on Build GRCm38	96
GenBankmRNA	BE134665.1	-	1	257	Chr. 15 - 55257517 - 55258017 [+] on Build GRCm38	96
GenBankmRNA	CO430172.1	-	1	500	Chr. 15 - 55257280 - 55258008 [+] on Build GRCm38	96
GenBankmRNA	BG862815.1	-	1	353	Chr. 15 - 55257421 - 55258103 [+] on Build GRCm38	96
GenBankmRNA	BF235914.1	-		344	Chr. - - [-] on Build	96

Adjacent Gene Details

	Gene name	Gene Symbol	Alias	Distance	Relative Direction	Location Chromsome
Upstream	predicted gene 9920	Gm9920	ENSMUSG00000053749	-143.5kb	Anti-sense	Chr. 15 - 55099917 - 55113582 on NCBI Build GRCm38
Downstream	collagen, type XIV, alpha 1	Col14a1	5730412L22Rik, AW108078	48.4kb	Sense	Chr. 15 - 55307706 - 55520803 on NCBI Build GRCm38

More Information

Additional Information:

Based on assay re-evaluation, this assay may detect genomic DNA. Please contact Tech Support if you need more information.

Set Membership:

Ambion siRNA available

Amplicon length between 86 and 100

3' Most

Detect Genomic DNA

Mus musculus

1700

Both primers and probe map within a single exon

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Deptor

Panther Classification:

Molecular Function -

guanyl-nucleotide exchange factor

Gene Ontology Categories:

Function(s)

MicroArray Probes:

Affymetrix ABI

Array Name	Probe IDs	Targets	Target Type
Affymetrix Mouse Clariom S Array	PSR1500002699.mm.1	NM_001037937.3	Refseq
Affymetrix Mouse Clariom S Array	PSR1500002699.mm.1	NM_145470.3	Refseq
Affymetrix Mouse Clariom S Array	PSR1500002699.mm.1	TC1500000392.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR1500002700.mm.1	NM_001037937.3	Refseq
Affymetrix Mouse Clariom S Array	PSR1500002700.mm.1	NM_145470.3	Refseq
Affymetrix Mouse Clariom S Array	PSR1500002700.mm.1	TC1500000392.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR1500002701.mm.1	NM_001037937.3	Refseq
Affymetrix Mouse Clariom S Array	PSR1500002701.mm.1	NM_145470.3	Refseq
Affymetrix Mouse Clariom S Array	PSR1500002701.mm.1	TC1500000392.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR1500002703.mm.1	NM_001037937.3	Refseq
Affymetrix Mouse Clariom S Array	PSR1500002703.mm.1	NM_145470.3	Refseq
Affymetrix Mouse Clariom S Array	PSR1500002703.mm.1	TC1500000392.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR1500002697.mm.1	NM_001037937.3	Refseq
Affymetrix Mouse Clariom S Array	PSR1500002697.mm.1	NM_145470.3	Refseq
Affymetrix Mouse Clariom S Array	PSR1500002697.mm.1	TC1500000392.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR1500002698.mm.1	NM_001037937.3	Refseq
Affymetrix Mouse Clariom S Array	PSR1500002698.mm.1	NM_145470.3	Refseq
Affymetrix Mouse Clariom S Array	PSR1500002698.mm.1	TC1500000392.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR1500002702.mm.1	NM_001037937.3	Refseq
Affymetrix Mouse Clariom S Array	PSR1500002702.mm.1	NM_145470.3	Refseq
Affymetrix Mouse Clariom S Array	PSR1500002702.mm.1	TC1500000392.mm.1	MTA TC

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Genomic Map