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See other SLC25A22 CNV Assays ›
Gene Symbol
SLC25A22
Assay Reference Genome
Location

Chr.11:791544 on build GRCh38
Cytoband
11p15.5
Assay ID Hs00014909_cn
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Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 79751

Gene Name:

 solute carrier family 25 member 22

Gene Aliases:

 EIEE3, GC-1, GC1, NET44

Location:

 Chr.11:790475-798269 on Build GRCh38

Assay Gene Location:

 Within Exon 13
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
SLC25A22 NM_001191060.1 10 1890 NP_001177989.1
NM_001191061.1 10 1559 NP_001177990.1
NM_024698.5 10 1727 NP_078974.1
XM_011520369.1 10 1601 XP_011518671.1
XM_011520370.1 10 1669 XP_011518672.1
XM_011520371.1 10 1554 XP_011518673.1
AJ428202.1 9 1447 CAD21007.1
AK023106.1 9 1447 BAB14407.1
AL832423.1 5 979
BC019033.2 10 1525 AAH19033.1
BC023545.2 10 1685 AAH23545.1
BC024212.2 6 1068 AAH24212.2

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv552871 Chr.11:766479 - 870446 on Build GRCh38 Loss SNORA52 TSPAN4 PANO1 LOC171391 PNPLA2 CEND1 PDDC1 SLC25A22 CD151 CHID1 CRACR2B PIDD1 RPLP2 POLR2L
nsv469923 Chr.11:378188 - 1302334 on Build GRCh38 Loss DRD4 IRF7 ANO9 LRRC56 LOC143666 DEAF1 PTDSS2 MIR210 HRAS LOC171391 MUC5B CDHR5 PDDC1 TOLLIP TALDO1 B4GALNT4 PKP3 MIR6744 CD151 PIDD1 MUC2 LMNTD2 SIGIRR POLR2L SCT AP2A2 SNORA52 TSPAN4 MUC5AC MIR210HG PANO1 PNPLA2 CEND1 EPS8L2 RASSF7 LOC101927503 LOC101059906 RNH1 SLC25A22 MUC6 TMEM80 CHID1 CRACR2B PHRF1 RPLP2
dgv1013n100 Chr.11:772982 - 933569 on Build GRCh38 Gain AP2A2 SNORA52 TSPAN4 PANO1 LOC171391 PNPLA2 CEND1 PDDC1 SLC25A22 CD151 CHID1 CRACR2B PIDD1 RPLP2 POLR2L
esv2759794 Chr.11:409846 - 1336162 on Build GRCh38 Loss DRD4 IRF7 ANO9 LRRC56 LOC143666 DEAF1 PTDSS2 MIR210 HRAS LOC171391 MUC5B CDHR5 PDDC1 TOLLIP TALDO1 MIR6744 CD151 PIDD1 MUC2 LMNTD2 SIGIRR POLR2L SCT AP2A2 SNORA52 TSPAN4 MUC5AC MIR210HG PANO1 PNPLA2 CEND1 EPS8L2 RASSF7 LOC101927503 TOLLIP-AS1 LOC101059906 RNH1 SLC25A22 MUC6 TMEM80 CHID1 CRACR2B PHRF1 RPLP2
nsv1040044 Chr.11:776335 - 900929 on Build GRCh38 Gain+Loss SNORA52 TSPAN4 PANO1 LOC171391 PNPLA2 CEND1 PDDC1 SLC25A22 CD151 CHID1 CRACR2B PIDD1 RPLP2 POLR2L
nsv552870 Chr.11:743813 - 810882 on Build GRCh38 Loss PDDC1 TALDO1 SLC25A22 PIDD1 PANO1 LOC171391 CEND1 RPLP2
dgv182e199 Chr.11:349830 - 943372 on Build GRCh38 Deletion DRD4 IRF7 ANO9 LRRC56 LOC143666 DEAF1 PTDSS2 MIR210 HRAS LOC171391 CDHR5 PDDC1 TALDO1 B4GALNT4 PKP3 CD151 PIDD1 LMNTD2 SIGIRR POLR2L SCT AP2A2 SNORA52 TSPAN4 MIR210HG PANO1 PNPLA2 CEND1 EPS8L2 RASSF7 LOC101059906 RNH1 SLC25A22 TMEM80 CHID1 CRACR2B PHRF1 RPLP2
nsv8759 Chr.11:775539 - 835248 on Build GRCh38 Gain PDDC1 SNORA52 SLC25A22 CD151 CRACR2B PIDD1 PANO1 LOC171391 PNPLA2 CEND1 RPLP2
nsv1159791 Chr.11:461793 - 909492 on Build GRCh38 Deletion DRD4 IRF7 LRRC56 LOC143666 DEAF1 PTDSS2 MIR210 HRAS LOC171391 CDHR5 PDDC1 TALDO1 CD151 PIDD1 LMNTD2 POLR2L SCT SNORA52 TSPAN4 MIR210HG PANO1 PNPLA2 CEND1 EPS8L2 RASSF7 LOC101059906 RNH1 SLC25A22 TMEM80 CHID1 CRACR2B PHRF1 RPLP2
nsv951272 Chr.11:751201 - 911500 on Build GRCh38 Deletion SNORA52 TSPAN4 PANO1 LOC171391 PNPLA2 CEND1 PDDC1 TALDO1 SLC25A22 CD151 CHID1 CRACR2B PIDD1 RPLP2 POLR2L

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More Information


Additional Information:

For this assay, SNP(s) [rs112476979] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Set Membership:

 Intragenic Exonic DGV Variation

Panther Classification:

Gene Ontology Categories:

Function(s) Process(es)


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