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Gene Symbol
SLC25A22
Assay Reference Genome
Location

Chr.11:791544 on build GRCh38
Cytoband
11p15.5
Assay ID Hs00014909_cn
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Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 79751

Gene Name:

 solute carrier family 25 member 22

Gene Aliases:

 EIEE3, GC-1, GC1, NET44

Location:

 Chr.11:790475-798269 on Build GRCh38

Assay Gene Location:

 Within Exon 13
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
SLC25A22 NM_001191060.1 10 1890 NP_001177989.1
NM_001191061.1 10 1559 NP_001177990.1
NM_024698.5 10 1727 NP_078974.1
XM_011520369.1 10 1601 XP_011518671.1
XM_011520370.1 10 1669 XP_011518672.1
XM_011520371.1 10 1554 XP_011518673.1
AJ428202.1 9 1447 CAD21007.1
AK023106.1 9 1447 BAB14407.1
AL832423.1 5 979
BC019033.2 10 1525 AAH19033.1
BC023545.2 10 1685 AAH23545.1
BC024212.2 6 1068 AAH24212.2

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv552871 Chr.11:766479 - 870446 on Build GRCh38 Loss CEND1 PIDD1 PNPLA2 LOC171391 CHID1 SNORA52 PDDC1 SLC25A22 POLR2L RPLP2 TSPAN4 CRACR2B PANO1 CD151
nsv469923 Chr.11:378188 - 1302334 on Build GRCh38 Loss PIDD1 MIR210HG IRF7 PNPLA2 SCT LOC171391 TALDO1 MUC5AC B4GALNT4 CHID1 MUC5B SNORA52 RNH1 LMNTD2 RPLP2 CRACR2B TMEM80 EPS8L2 DRD4 HRAS LOC101927503 CEND1 PHRF1 RASSF7 MUC2 MIR210 PKP3 LOC101059906 CDHR5 DEAF1 TOLLIP MIR6744 PDDC1 SLC25A22 ANO9 POLR2L MUC6 TSPAN4 SIGIRR PTDSS2 LRRC56 AP2A2 PANO1 CD151 LOC143666
dgv1013n100 Chr.11:772982 - 933569 on Build GRCh38 Gain CEND1 PIDD1 PNPLA2 LOC171391 CHID1 SNORA52 PDDC1 SLC25A22 POLR2L RPLP2 TSPAN4 CRACR2B AP2A2 PANO1 CD151
esv2759794 Chr.11:409846 - 1336162 on Build GRCh38 Loss PIDD1 MIR210HG IRF7 PNPLA2 TOLLIP-AS1 SCT LOC171391 TALDO1 MUC5AC CHID1 MUC5B SNORA52 RNH1 LMNTD2 RPLP2 CRACR2B TMEM80 EPS8L2 DRD4 HRAS LOC101927503 CEND1 PHRF1 RASSF7 MUC2 MIR210 LOC101059906 CDHR5 DEAF1 TOLLIP MIR6744 PDDC1 SLC25A22 ANO9 POLR2L MUC6 TSPAN4 SIGIRR PTDSS2 LRRC56 AP2A2 PANO1 CD151 LOC143666
dgv182e199 Chr.11:349830 - 943372 on Build GRCh38 Deletion PIDD1 MIR210HG IRF7 PNPLA2 SCT LOC171391 TALDO1 B4GALNT4 CHID1 SNORA52 RNH1 LMNTD2 RPLP2 CRACR2B TMEM80 EPS8L2 DRD4 HRAS CEND1 PHRF1 RASSF7 MIR210 PKP3 LOC101059906 CDHR5 DEAF1 PDDC1 SLC25A22 ANO9 POLR2L TSPAN4 SIGIRR PTDSS2 LRRC56 AP2A2 PANO1 CD151 LOC143666
nsv552870 Chr.11:743813 - 810882 on Build GRCh38 Loss CEND1 PIDD1 SLC25A22 LOC171391 RPLP2 TALDO1 PANO1 PDDC1
nsv1040044 Chr.11:776335 - 900929 on Build GRCh38 Gain+Loss CEND1 PIDD1 PNPLA2 LOC171391 CHID1 SNORA52 PDDC1 SLC25A22 POLR2L RPLP2 TSPAN4 CRACR2B PANO1 CD151
nsv8759 Chr.11:775539 - 835248 on Build GRCh38 Gain CEND1 PIDD1 SLC25A22 PNPLA2 LOC171391 RPLP2 CRACR2B PANO1 SNORA52 CD151 PDDC1
nsv1159791 Chr.11:461793 - 909492 on Build GRCh38 Deletion PIDD1 MIR210HG IRF7 PNPLA2 SCT LOC171391 TALDO1 CHID1 SNORA52 RNH1 LMNTD2 RPLP2 CRACR2B TMEM80 EPS8L2 DRD4 HRAS CEND1 PHRF1 RASSF7 MIR210 LOC101059906 CDHR5 DEAF1 PDDC1 SLC25A22 POLR2L TSPAN4 PTDSS2 LRRC56 PANO1 CD151 LOC143666
nsv951272 Chr.11:751201 - 911500 on Build GRCh38 Deletion CEND1 PIDD1 PNPLA2 LOC171391 TALDO1 CHID1 SNORA52 PDDC1 SLC25A22 POLR2L RPLP2 TSPAN4 CRACR2B PANO1 CD151

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More Information


Additional Information:

For this assay, SNP(s) [rs112476979] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Set Membership:

 Intragenic Exonic DGV Variation

Panther Classification:

Gene Ontology Categories:

Function(s) Process(es)


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