Name: [Hs00027571_cn] [SLC12A6]
Creator: Thermo Fisher Scientific
Keywords: [SLC12A6] Assay, [solute carrier family 12 member 6] Assay

Genomic Map

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Assay Details

Entrez Gene ID:	9990
Gene Name:	solute carrier family 12 member 6
Gene Aliases:	ACCPN, KCC3, KCC3A, KCC3B
Location:	Chr.15:34229996-34338064 on Build GRCh38
Assay Gene Location:	Within Exon 27

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
SLC12A6	NM_001042494.1	26	7254	NP_001035959.1
	NM_001042495.1	26	6929	NP_001035960.1
	NM_001042496.1	26	7320	NP_001035961.1
	NM_001042497.1	24	7023	NP_001035962.1
	NM_005135.2	25	6893	NP_005126.1
	NM_133647.1	25	7068	NP_598408.1
	XM_006720793.3	24	7803	XP_006720856.1
	AK056019.1	2	1490

Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv1052620	Chr.15:32612402 - 34538731 on Build GRCh38	Gain	MIR1233-2 TMCO5B GREM1 LOC105370757 GOLGA8B LPCAT4 LOC100131315 PGBD4 ARHGAP11A LOC101928134 FMN1 NUTM1 SCG5 EMC7 CHRM5 EMC4 AVEN MIR1233-1 RYR3 NOP10 GOLGA8A KATNBL1 LOC101928042 SLC12A6
esv33337	Chr.15:31689863 - 34575097 on Build GRCh38	Gain+Loss	MIR1233-2 WHAMMP1 LOC105370757 GOLGA8B LOC100653133 LOC100131315 LOC101928134 FMN1 SCG5 EMC7 AVEN GOLGA8O GOLGA8N LOC101928042 CHRNA7 TMCO5B GREM1 GOLGA8K LPCAT4 PGBD4 ARHGAP11A LOC101060588 NUTM1 ULK4P1 CHRM5 EMC4 LOC105370940 MIR1233-1 LOC100996255 RYR3 NOP10 GOLGA8A KATNBL1 SLC12A6
esv3569431	Chr.15:33564570 - 35080307 on Build GRCh38	Gain	MIR1233-2 LOC101928174 GOLGA8B LPCAT4 PGBD4 GJD2 ACTC1 ZNF770 NUTM1 EMC7 CHRM5 AQR EMC4 AVEN MIR1233-1 RYR3 NOP10 GOLGA8A KATNBL1 SLC12A6
dgv4456n54	Chr.15:32604149 - 34557061 on Build GRCh38	Gain	MIR1233-2 LOC105370757 GOLGA8B LOC100131315 LOC101928134 FMN1 SCG5 EMC7 AVEN GOLGA8N LOC101928042 TMCO5B GREM1 LPCAT4 PGBD4 ARHGAP11A NUTM1 CHRM5 EMC4 MIR1233-1 RYR3 NOP10 GOLGA8A KATNBL1 SLC12A6