Name: [Hs00027571_cn] [SLC12A6]
Creator: Thermo Fisher Scientific
Keywords: [SLC12A6] Assay, [solute carrier family 12 member 6] Assay

Genomic Map

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Assay Details

Entrez Gene ID:	9990
Gene Name:	solute carrier family 12 member 6
Gene Aliases:	ACCPN, KCC3, KCC3A, KCC3B
Location:	Chr.15:34229996-34338064 on Build GRCh38
Assay Gene Location:	Within Exon 27

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
SLC12A6	NM_001042494.1	26	7254	NP_001035959.1
	NM_001042495.1	26	6929	NP_001035960.1
	NM_001042496.1	26	7320	NP_001035961.1
	NM_001042497.1	24	7023	NP_001035962.1
	NM_005135.2	25	6893	NP_005126.1
	NM_133647.1	25	7068	NP_598408.1
	XM_006720793.3	24	7803	XP_006720856.1
	AK056019.1	2	1490

Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv1052620	Chr.15:32612402 - 34538731 on Build GRCh38	Gain	TMCO5B RYR3 MIR1233-1 EMC4 GREM1 LOC100131315 NOP10 GOLGA8A LOC101928042 GOLGA8B NUTM1 LOC101928134 ARHGAP11A SCG5 SLC12A6 FMN1 LOC105370757 AVEN EMC7 KATNBL1 LPCAT4 CHRM5 PGBD4 MIR1233-2
esv33337	Chr.15:31689863 - 34575097 on Build GRCh38	Gain+Loss	LOC100653133 RYR3 MIR1233-1 EMC4 GREM1 LOC100996255 GOLGA8A LOC101928042 GOLGA8B NUTM1 LOC101928134 ARHGAP11A SCG5 GOLGA8K ULK4P1 LOC105370940 LOC105370757 EMC7 CHRM5 PGBD4 GOLGA8N TMCO5B GOLGA8O WHAMMP1 LOC100131315 NOP10 CHRNA7 SLC12A6 FMN1 AVEN LOC101060588 KATNBL1 LPCAT4 MIR1233-2
esv3569431	Chr.15:33564570 - 35080307 on Build GRCh38	Gain	LOC101928174 RYR3 MIR1233-1 GJD2 EMC4 NOP10 GOLGA8A AQR GOLGA8B NUTM1 SLC12A6 ZNF770 AVEN EMC7 KATNBL1 LPCAT4 CHRM5 PGBD4 MIR1233-2 ACTC1
dgv4456n54	Chr.15:32604149 - 34557061 on Build GRCh38	Gain	RYR3 MIR1233-1 EMC4 GREM1 GOLGA8A LOC101928042 GOLGA8B NUTM1 LOC101928134 ARHGAP11A SCG5 LOC105370757 EMC7 CHRM5 PGBD4 GOLGA8N TMCO5B LOC100131315 NOP10 SLC12A6 FMN1 AVEN KATNBL1 LPCAT4 MIR1233-2