Name: [Hs00034398_cn] [SLC12A6]
Creator: Thermo Fisher Scientific
Keywords: [SLC12A6] Assay, [solute carrier family 12 member 6] Assay

Genomic Map

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Assay Details

Entrez Gene ID:	9990
Gene Name:	solute carrier family 12 member 6
Gene Aliases:	ACCPN, KCC3, KCC3A, KCC3B
Location:	Chr.15:34229996-34338064 on Build GRCh38
Assay Gene Location:	Within Exon 27

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
SLC12A6	NM_001042494.1	26	5099	NP_001035959.1
	NM_001042495.1	26	4774	NP_001035960.1
	NM_001042496.1	26	5165	NP_001035961.1
	NM_001042497.1	24	4868	NP_001035962.1
	NM_005135.2	25	4738	NP_005126.1
	NM_133647.1	25	4913	NP_598408.1
	XM_006720793.3	24	5648	XP_006720856.1
	AK056019.1	1	119

Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv1052620	Chr.15:32612402 - 34538731 on Build GRCh38	Gain	GREM1 EMC7 FMN1 GOLGA8B LPCAT4 LOC100131315 KATNBL1 LOC101928134 TMCO5B PGBD4 AVEN GOLGA8A EMC4 SLC12A6 RYR3 LOC105370757 NUTM1 MIR1233-1 LOC101928042 ARHGAP11A MIR1233-2 NOP10 CHRM5 SCG5
esv33337	Chr.15:31689863 - 34575097 on Build GRCh38	Gain+Loss	GREM1 WHAMMP1 LOC100996255 FMN1 LPCAT4 LOC100131315 GOLGA8K LOC101928134 TMCO5B GOLGA8A EMC4 SLC12A6 RYR3 LOC105370757 ULK4P1 ARHGAP11A NOP10 EMC7 LOC101060588 GOLGA8O GOLGA8B LOC105370940 KATNBL1 PGBD4 AVEN GOLGA8N LOC100653133 NUTM1 MIR1233-1 LOC101928042 MIR1233-2 CHRNA7 CHRM5 SCG5
esv3569431	Chr.15:33564570 - 35080307 on Build GRCh38	Gain	ACTC1 EMC7 GJD2 AQR ZNF770 GOLGA8B LPCAT4 KATNBL1 PGBD4 AVEN GOLGA8A EMC4 SLC12A6 RYR3 NUTM1 LOC101928174 MIR1233-1 MIR1233-2 NOP10 CHRM5
dgv4456n54	Chr.15:32604149 - 34557061 on Build GRCh38	Gain	GREM1 FMN1 LPCAT4 LOC100131315 LOC101928134 TMCO5B GOLGA8A EMC4 SLC12A6 RYR3 LOC105370757 ARHGAP11A NOP10 EMC7 GOLGA8B KATNBL1 PGBD4 AVEN GOLGA8N NUTM1 MIR1233-1 LOC101928042 MIR1233-2 CHRM5 SCG5