Genomic Map
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Target Gene Details
Entrez Gene ID: | 9990 |
Gene Name: | solute carrier family 12 member 6 |
Gene Aliases: |
ACCPN, KCC3, KCC3A, KCC3B |
Location: |
Chr.15:34229996-34338064 on Build GRCh38 |
Assay Gene Location: | Within Exon 21 |
| Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
|---|---|---|---|---|
| SLC12A6 | NM_001042494.1 | 20 | 2922 | NP_001035959.1 |
| NM_001042495.1 | 20 | 2597 | NP_001035960.1 | |
| NM_001042496.1 | 20 | 2988 | NP_001035961.1 | |
| NM_001042497.1 | 18 | 2691 | NP_001035962.1 | |
| NM_005135.2 | 19 | 2561 | NP_005126.1 | |
| NM_133647.1 | 19 | 2736 | NP_598408.1 | |
| XM_006720793.3 | 18 | 3471 | XP_006720856.1 | |
| AF105366.1 | 19 | 2736 | AAD39742.1 | |
| AF108831.1 | 19 | 2470 | AAD25337.1 | |
| AF116242.1 | 19 | 2572 | AAF24986.1 | |
| AF477977.1 | 20 | 2929 | AAL85335.1 | |
| AF531258.1 | 18 | 2691 | AAQ10026.1 | |
| AF531259.1 | 20 | 2929 | AAQ10027.1 | |
| AF531260.1 | 20 | 2567 | AAQ10028.1 | |
| AK128133.1 | 18 | 2244 | ||
| AK292550.1 | 20 | 2675 | ||
| AK315283.1 | 19 | 2533 | ||
| AL117500.1 | 16 | 2164 | CAB55965.1 | |
| BC051744.1 | 20 | 2925 | AAH51744.1 | |
| BC070107.1 | 20 | 2592 | ||
| BC126241.1 | 19 | 2469 | ||
| BC126243.1 | 19 | 2469 | ||
| BX648195.1 | 19 | 3678 | CAI46042.1 | |
| DQ138323.1 | 20 | 2987 | ABA02873.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
| Target Variation |
Location | CNV Subtype |
Genes |
|---|---|---|---|
| esv3636106 | Chr.15:34238802 - 34242941 on Build GRCh38 | Gain |
 SLC12A6
|
| esv2659969 | Chr.15:34239070 - 34242993 on Build GRCh38 | Deletion |
SLC12A6
|
| nsv1052620 | Chr.15:32612402 - 34538731 on Build GRCh38 | Gain |
LOC101928134
TMCO5B
PGBD4
NUTM1
LOC101928042
RYR3
CHRM5
SLC12A6
EMC4
GOLGA8A
ARHGAP11A
FMN1
GREM1
NOP10
SCG5
LOC105370757
LOC100131315
EMC7
LPCAT4
GOLGA8B
MIR1233-2
MIR1233-1
KATNBL1
AVEN
|
| esv33337 | Chr.15:31689863 - 34575097 on Build GRCh38 | Gain+Loss |
LOC101928134
TMCO5B
PGBD4
NUTM1
LOC105370940
LOC101928042
RYR3
EMC4
ARHGAP11A
FMN1
EMC7
GOLGA8B
CHRNA7
MIR1233-2
GOLGA8N
MIR1233-1
KATNBL1
AVEN
LOC100653133
GOLGA8O
CHRM5
SLC12A6
WHAMMP1
GOLGA8A
GREM1
ULK4P1
NOP10
SCG5
LOC105370757
LOC100131315
LPCAT4
LOC100996255
LOC101060588
GOLGA8K
|
| esv3569431 | Chr.15:33564570 - 35080307 on Build GRCh38 | Gain |
PGBD4
NUTM1
GJD2
ZNF770
RYR3
CHRM5
LOC101928174
SLC12A6
EMC4
GOLGA8A
AQR
ACTC1
NOP10
EMC7
LPCAT4
GOLGA8B
MIR1233-2
MIR1233-1
KATNBL1
AVEN
|
| dgv4456n54 | Chr.15:32604149 - 34557061 on Build GRCh38 | Gain |
LOC101928134
TMCO5B
PGBD4
NUTM1
LOC101928042
RYR3
EMC4
ARHGAP11A
FMN1
EMC7
GOLGA8B
MIR1233-2
GOLGA8N
MIR1233-1
KATNBL1
AVEN
CHRM5
SLC12A6
GOLGA8A
GREM1
NOP10
SCG5
LOC105370757
LOC100131315
LPCAT4
|
Back To TopMore Information
Set Membership: |
Intragenic
Exonic
DGV Variation
|
Panther Classification:
Gene Ontology Categories:
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