Name: [Hs00045628_cn] [SLC12A6]
Creator: Thermo Fisher Scientific
Keywords: [SLC12A6] Assay, [solute carrier family 12 member 6] Assay

Genomic Map

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Assay Details

Entrez Gene ID:	9990
Gene Name:	solute carrier family 12 member 6
Gene Aliases:	ACCPN, KCC3, KCC3A, KCC3B
Location:	Chr.15:34229996-34338064 on Build GRCh38
Assay Gene Location:	Within Exon 27

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
SLC12A6	NM_001042494.1	26	4808	NP_001035959.1
	NM_001042495.1	26	4483	NP_001035960.1
	NM_001042496.1	26	4874	NP_001035961.1
	NM_001042497.1	24	4577	NP_001035962.1
	NM_005135.2	25	4447	NP_005126.1
	NM_133647.1	25	4622	NP_598408.1
	XM_006720793.3	24	5357	XP_006720856.1

Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv1052620	Chr.15:32612402 - 34538731 on Build GRCh38	Gain	LOC105370757 FMN1 NOP10 RYR3 LOC101928134 PGBD4 LOC101928042 EMC4 TMCO5B EMC7 LOC100131315 GOLGA8A GOLGA8B SLC12A6 ARHGAP11A KATNBL1 LPCAT4 CHRM5 MIR1233-2 AVEN GREM1 NUTM1 MIR1233-1 SCG5
esv33337	Chr.15:31689863 - 34575097 on Build GRCh38	Gain+Loss	LOC105370757 NOP10 PGBD4 LOC101928042 GOLGA8O EMC4 LOC100653133 EMC7 LOC100131315 GOLGA8N GOLGA8A KATNBL1 GOLGA8K GREM1 CHRNA7 FMN1 RYR3 LOC101928134 LOC101060588 LOC100996255 TMCO5B GOLGA8B SLC12A6 ARHGAP11A LPCAT4 CHRM5 MIR1233-2 ULK4P1 AVEN LOC105370940 WHAMMP1 NUTM1 MIR1233-1 SCG5
esv3569431	Chr.15:33564570 - 35080307 on Build GRCh38	Gain	NOP10 RYR3 PGBD4 EMC4 ZNF770 EMC7 GOLGA8A LOC101928174 GOLGA8B SLC12A6 KATNBL1 LPCAT4 AQR CHRM5 MIR1233-2 AVEN NUTM1 MIR1233-1 GJD2 ACTC1
dgv4456n54	Chr.15:32604149 - 34557061 on Build GRCh38	Gain	LOC105370757 NOP10 PGBD4 LOC101928042 EMC4 EMC7 LOC100131315 GOLGA8N GOLGA8A KATNBL1 GREM1 FMN1 RYR3 LOC101928134 TMCO5B GOLGA8B SLC12A6 ARHGAP11A LPCAT4 CHRM5 MIR1233-2 AVEN NUTM1 MIR1233-1 SCG5