Name: [Hs00045628_cn] [SLC12A6]
Creator: Thermo Fisher Scientific
Keywords: [SLC12A6] Assay, [solute carrier family 12 member 6] Assay

Genomic Map

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Assay Details

Entrez Gene ID:	9990
Gene Name:	solute carrier family 12 member 6
Gene Aliases:	ACCPN, KCC3, KCC3A, KCC3B
Location:	Chr.15:34229996-34338064 on Build GRCh38
Assay Gene Location:	Within Exon 27

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
SLC12A6	NM_001042494.1	26	4808	NP_001035959.1
	NM_001042495.1	26	4483	NP_001035960.1
	NM_001042496.1	26	4874	NP_001035961.1
	NM_001042497.1	24	4577	NP_001035962.1
	NM_005135.2	25	4447	NP_005126.1
	NM_133647.1	25	4622	NP_598408.1
	XM_006720793.3	24	5357	XP_006720856.1

Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv1052620	Chr.15:32612402 - 34538731 on Build GRCh38	Gain	LOC105370757 MIR1233-2 AVEN LPCAT4 KATNBL1 MIR1233-1 GREM1 EMC4 RYR3 ARHGAP11A GOLGA8A NUTM1 LOC101928042 SLC12A6 EMC7 TMCO5B CHRM5 NOP10 FMN1 LOC100131315 GOLGA8B PGBD4 LOC101928134 SCG5
esv33337	Chr.15:31689863 - 34575097 on Build GRCh38	Gain+Loss	LOC100996255 GOLGA8N LOC100653133 LOC105370757 MIR1233-2 AVEN CHRNA7 LPCAT4 MIR1233-1 GREM1 EMC4 NUTM1 LOC101928042 SLC12A6 ULK4P1 TMCO5B NOP10 LOC100131315 PGBD4 SCG5 LOC101060588 KATNBL1 GOLGA8O RYR3 ARHGAP11A GOLGA8A LOC105370940 EMC7 CHRM5 FMN1 GOLGA8K GOLGA8B WHAMMP1 LOC101928134
esv3569431	Chr.15:33564570 - 35080307 on Build GRCh38	Gain	MIR1233-2 AVEN LPCAT4 KATNBL1 MIR1233-1 LOC101928174 ACTC1 EMC4 RYR3 GOLGA8A NUTM1 GJD2 SLC12A6 EMC7 CHRM5 NOP10 GOLGA8B PGBD4 ZNF770 AQR
dgv4456n54	Chr.15:32604149 - 34557061 on Build GRCh38	Gain	GOLGA8N LOC105370757 MIR1233-2 AVEN LPCAT4 MIR1233-1 GREM1 EMC4 NUTM1 LOC101928042 SLC12A6 TMCO5B NOP10 LOC100131315 PGBD4 SCG5 KATNBL1 RYR3 ARHGAP11A GOLGA8A EMC7 CHRM5 FMN1 GOLGA8B LOC101928134