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See other AGPAT2 CNV Assays ›
Gene Symbol
AGPAT2
Assay Reference Genome
Location

Chr.9:136676976 on build GRCh38
Cytoband
9q34.3
Assay ID Hs00085627_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 10555

Gene Name:

 1-acylglycerol-3-phosphate O-acyltransferase 2

Gene Aliases:

 1-AGPAT2, BSCL, BSCL1, LPAAB, LPAAT-beta

Location:

 Chr.9:136673143-136687459 on Build GRCh38

Assay Gene Location:

 Overlaps Intron 3 - Exon 3
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
AGPAT2 NM_001012727.1 NP_001012745.1
NM_006412.3 NP_006403.2
AF000237.1 AAC51649.1
AF011374.1 AAB64299.1
BC000026.2 AAH00026.1
BC004529.2 AAH04529.1
BC007269.1 AAH07269.1
BC019292.1 AAH19292.1
BF347518.1
CN407343.1
U56418.2 AAB58776.2

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
dgv13005n54 Chr.9:136605258 - 136696482 on Build GRCh38 Loss EGFL7 LINC01451 MIR126 AGPAT2 HSPC324
nsv509334 Chr.9:136514168 - 136724663 on Build GRCh38 Insertion MIR4673 EGFL7 LINC01451 MIR126 AGPAT2 SNHG7 MIR4674 NOTCH1 NALT1 FAM69B HSPC324
nsv951203 Chr.9:136562849 - 136770848 on Build GRCh38 Deletion EGFL7 LCN6 AGPAT2 SNHG7 SNORA17A LCN8 LCN15 FAM69B HSPC324 LINC01451 MIR126 SNORA17B MIR6722 LCN10 LOC100128593
esv2759720 Chr.9:136356377 - 136932033 on Build GRCh38 Loss EGFL7 MIR4292 C9orf163 AGPAT2 SNHG7 SNORA17A MIR4674 INPP5E C9orf172 RABL6 LCN8 HSPC324 SDCCAG3 MIR126 TMEM141 SNORA17B SEC16A MAMDC4 MIR4479 NOTCH1 LOC100128593 MIR4673 LCN6 CCDC183-AS1 TRAF2 EDF1 DNLZ NALT1 PHPT1 LCN15 FAM69B LINC01451 CCDC183 MIR6722 LCN10 PMPCA SNAPC4 CARD9 GPSM1
nsv469918 Chr.9:136359865 - 137173890 on Build GRCh38 Loss MIR4292 C9orf163 AGPAT2 SNORA17A INPP5E MAN1B1 FBXW5 HSPC324 MIR126 SEC16A LCNL1 PTGDS LOC100128593 MIR4673 LCN6 CCDC183-AS1 TRAF2 DNLZ NPDC1 GRIN1 NALT1 PHPT1 LCN15 FAM69B C8G MAN1B1-AS1 C9orf139 MIR6722 LCN10 PMPCA LCN12 SNAPC4 EGFL7 SNHG7 TMEM210 MIR4674 C9orf172 RABL6 LCN8 PRR31 SDCCAG3 TMEM141 SNORA17B ABCA2 FUT7 CLIC3 MAMDC4 SAPCD2 DPP7 MIR3621 MIR4479 NOTCH1 EDF1 UAP1L1 LRRC26 ENTPD2 LOC101930307 LINC01451 C9orf142 CCDC183 CARD9
nsv8579 Chr.9:136505432 - 136760256 on Build GRCh38 Gain MIR4673 EGFL7 LCN6 AGPAT2 SNHG7 SNORA17A MIR4674 LCN8 NALT1 LCN15 FAM69B HSPC324 LINC01451 MIR126 SNORA17B MIR6722 LCN10 NOTCH1 LOC100128593
nsv1053781 Chr.9:136590694 - 136722927 on Build GRCh38 Gain EGFL7 LINC01451 MIR126 AGPAT2 FAM69B HSPC324
dgv13006n54 Chr.9:136619086 - 136725859 on Build GRCh38 Loss EGFL7 MIR126 AGPAT2 SNHG7 FAM69B HSPC324
esv2422220 Chr.9:136584135 - 137350098 on Build GRCh38 Deletion SSNA1 MIR4292 AGPAT2 SNORA17A EXD3 MAN1B1 FBXW5 HSPC324 MIR126 LCNL1 PTGDS LOC100128593 LCN6 C9orf173-AS1 CCDC183-AS1 TRAF2 TUBB4B TPRN NPDC1 GRIN1 NELFB PHPT1 LCN15 FAM69B C8G NDOR1 MAN1B1-AS1 C9orf139 SLC34A3 MIR6722 LCN10 LCN12 RNF224 EGFL7 SNHG7 TOR4A TMEM210 C9orf172 RABL6 ANAPC2 LCN8 TMEM203 PRR31 RNF208 TMEM141 SNORA17B ABCA2 FUT7 CLIC3 MAMDC4 SAPCD2 DPP7 MIR3621 MIR4479 CYSRT1 FAM166A EDF1 UAP1L1 LRRC26 STPG3 ENTPD2 LOC101930307 LINC01451 C9orf142 NRARP CCDC183

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