Name: [Hs00112209_cn] [SLC12A6]
Creator: Thermo Fisher Scientific
Keywords: [SLC12A6] Assay, [solute carrier family 12 member 6] Assay

Genomic Map

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Assay Details

Entrez Gene ID:	9990
Gene Name:	solute carrier family 12 member 6
Gene Aliases:	ACCPN, KCC3, KCC3A, KCC3B
Location:	Chr.15:34229996-34338064 on Build GRCh38
Assay Gene Location:	Within Exon 27

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
SLC12A6	NM_001042494.1	26	5751	NP_001035959.1
	NM_001042495.1	26	5426	NP_001035960.1
	NM_001042496.1	26	5817	NP_001035961.1
	NM_001042497.1	24	5520	NP_001035962.1
	NM_005135.2	25	5390	NP_005126.1
	NM_133647.1	25	5565	NP_598408.1
	XM_006720793.3	24	6300	XP_006720856.1
	AK056019.1

Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv1052620	Chr.15:32612402 - 34538731 on Build GRCh38	Gain	LOC101928134 FMN1 SCG5 NOP10 CHRM5 EMC4 LOC100131315 MIR1233-1 LOC105370757 LPCAT4 SLC12A6 KATNBL1 LOC101928042 ARHGAP11A AVEN GREM1 EMC7 MIR1233-2 RYR3 PGBD4 TMCO5B NUTM1 GOLGA8A GOLGA8B
esv33337	Chr.15:31689863 - 34575097 on Build GRCh38	Gain+Loss	LOC101928134 FMN1 SCG5 NOP10 CHRM5 EMC4 MIR1233-1 LPCAT4 LOC100996255 LOC101928042 ARHGAP11A AVEN RYR3 PGBD4 CHRNA7 LOC100653133 GOLGA8A GOLGA8B GOLGA8O GOLGA8N LOC100131315 WHAMMP1 LOC105370757 SLC12A6 KATNBL1 LOC105370940 ULK4P1 GREM1 EMC7 MIR1233-2 TMCO5B LOC101060588 NUTM1 GOLGA8K
esv3569431	Chr.15:33564570 - 35080307 on Build GRCh38	Gain	AQR NOP10 CHRM5 EMC4 ZNF770 MIR1233-1 LPCAT4 SLC12A6 KATNBL1 AVEN EMC7 MIR1233-2 RYR3 ACTC1 PGBD4 GJD2 NUTM1 GOLGA8A GOLGA8B LOC101928174
dgv4456n54	Chr.15:32604149 - 34557061 on Build GRCh38	Gain	LOC101928134 FMN1 SCG5 NOP10 CHRM5 EMC4 MIR1233-1 LPCAT4 LOC101928042 ARHGAP11A AVEN RYR3 PGBD4 GOLGA8A GOLGA8B GOLGA8N LOC100131315 LOC105370757 SLC12A6 KATNBL1 GREM1 EMC7 MIR1233-2 TMCO5B NUTM1