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See other CDH23 CNV Assays ›
Gene Symbol
CDH23
Assay Reference Genome
Location

Chr.10:71510139 on build GRCh38
Cytoband
10q22.1
Assay ID Hs00117033_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 64072

Gene Name:

 cadherin-related 23

Gene Aliases:

 CDHR23, USH1D

Location:

 Chr.10:71396934-71815947 on Build GRCh38

Assay Gene Location:

 Within Exon 5
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
CDH23 NM_001171930.1 4 593 NP_001165401.1
NM_001171931.1 4 593 NP_001165402.1
NM_001171932.1 4 593 NP_001165403.1
NM_022124.5 4 593 NP_071407.4
NM_052836.3 4 593 NP_443068.1
XM_006717940.3 4 587 XP_006718003.1
XM_006717942.3 4 587 XP_006718005.1
XM_011540039.2 4 587 XP_011538341.1
XM_011540042.2 4 587 XP_011538344.1
XM_011540043.2 4 587 XP_011538345.1
XM_011540044.2 4 228 XP_011538346.1
XM_011540045.2 4 587 XP_011538347.1
XM_011540048.2 4 587 XP_011538350.1
XM_011540049.2 4 587 XP_011538351.1
XM_011540051.2 4 587 XP_011538353.1
XM_017016499.1 4 593 XP_016871988.1
XM_017016500.1 4 587 XP_016871989.1
AF312024.1 3 203 AAG48303.1
AY010111.2 3 203 AAG27034.2
AY358617.1 4 243 AAQ88980.1
BC011570.1 4 598 AAH11570.1
BC032581.1 4 599 AAH32581.1
BC065284.1 4 570 AAH65284.1
BC108254.1 2 433 AAI08255.1
BC136976.1 4 463
BC136977.1 4 462
BC139903.1 4 585

Target Gene Details

Entrez Gene ID:

 102723377

Gene Name:

 uncharacterized LOC102723377

Gene Aliases:

 -

Location:

 Chr.10:71508153-71511920 on Build GRCh38

Assay Gene Location:

 Within Intron 1
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
LOC102723377 NR_120672.1
BX103495.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
esv2759766 Chr.10:71478146 - 71526398 on Build GRCh38 Loss CDH23 LOC102723377
nsv1044971 Chr.10:71272698 - 71673682 on Build GRCh38 Gain CDH23 UNC5B LOC102723377 SLC29A3
nsv523021 Chr.10:71480316 - 71585307 on Build GRCh38 Gain CDH23 LOC102723377
nsv551502 Chr.10:71402480 - 71687524 on Build GRCh38 Gain CDH23 LOC102723377

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More Information


Additional Information:

For this assay, SNP(s) [rs116624130] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Set Membership:

 Intragenic Exonic Intronic Non-exonic DGV Variation

Panther Classification:

Molecular Function -

cadherin

Gene Ontology Categories:

Function(s) Process(es)


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