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Gene Symbol
SLC12A6
Assay Reference Genome
Location

Chr.15:34233499 on build GRCh38
Cytoband
15q14
Assay ID Hs00118377_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 9990

Gene Name:

 solute carrier family 12 member 6

Gene Aliases:

 ACCPN, KCC3, KCC3A, KCC3B

Location:

 Chr.15:34229996-34338064 on Build GRCh38

Assay Gene Location:

 Within Exon 27
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
SLC12A6 NM_001042494.1 26 4185 NP_001035959.1
NM_001042495.1 26 3860 NP_001035960.1
NM_001042496.1 26 4251 NP_001035961.1
NM_001042497.1 24 3954 NP_001035962.1
NM_005135.2 25 3824 NP_005126.1
NM_133647.1 25 3999 NP_598408.1
XM_006720793.3 24 4734 XP_006720856.1
AF105366.1 25 3999 AAD39742.1
AF108831.1 AAD25337.1
AF477977.1 26 4192 AAL85335.1
AF531258.1 24 3954 AAQ10026.1
AF531259.1 26 4192 AAQ10027.1
AF531260.1 26 3830 AAQ10028.1
AK128133.1 24 3507
AL117500.1 22 3427 CAB55965.1
BC051744.1 26 4217 AAH51744.1
BC070107.1 26 3855
BX648195.1 25 4871 CAI46042.1
DQ138323.1 26 4250 ABA02873.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv1052620 Chr.15:32612402 - 34538731 on Build GRCh38 Gain ARHGAP11A GOLGA8B GOLGA8A AVEN LOC100131315 SLC12A6 MIR1233-1 LOC101928134 SCG5 CHRM5 FMN1 RYR3 EMC7 TMCO5B GREM1 NOP10 LPCAT4 KATNBL1 EMC4 PGBD4 MIR1233-2 NUTM1 LOC101928042 LOC105370757
esv33337 Chr.15:31689863 - 34575097 on Build GRCh38 Gain+Loss ARHGAP11A LOC100996255 ULK4P1 WHAMMP1 GOLGA8B GOLGA8K LOC100131315 SLC12A6 LOC101928134 SCG5 CHRM5 CHRNA7 FMN1 RYR3 EMC7 LOC101060588 LPCAT4 NUTM1 LOC105370757 GOLGA8O LOC100653133 GOLGA8A AVEN GOLGA8N MIR1233-1 LOC105370940 TMCO5B GREM1 NOP10 KATNBL1 EMC4 PGBD4 MIR1233-2 LOC101928042
esv3569431 Chr.15:33564570 - 35080307 on Build GRCh38 Gain LOC101928174 ACTC1 GOLGA8B GOLGA8A AVEN SLC12A6 MIR1233-1 CHRM5 ZNF770 RYR3 EMC7 NOP10 LPCAT4 KATNBL1 EMC4 PGBD4 MIR1233-2 NUTM1 AQR GJD2
dgv4456n54 Chr.15:32604149 - 34557061 on Build GRCh38 Gain ARHGAP11A GOLGA8B LOC100131315 SLC12A6 LOC101928134 SCG5 CHRM5 FMN1 RYR3 EMC7 LPCAT4 NUTM1 LOC105370757 GOLGA8A AVEN GOLGA8N MIR1233-1 TMCO5B GREM1 NOP10 KATNBL1 EMC4 PGBD4 MIR1233-2 LOC101928042

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