Name: [Hs00121055_cn] [SLC12A6]
Creator: Thermo Fisher Scientific
Keywords: [SLC12A6] Assay, [solute carrier family 12 member 6] Assay

Genomic Map

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Assay Details

Entrez Gene ID:	9990
Gene Name:	solute carrier family 12 member 6
Gene Aliases:	ACCPN, KCC3, KCC3A, KCC3B
Location:	Chr.15:34229996-34338064 on Build GRCh38
Assay Gene Location:	Within Exon 27

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
SLC12A6	NM_001042494.1	26	5507	NP_001035959.1
	NM_001042495.1	26	5182	NP_001035960.1
	NM_001042496.1	26	5573	NP_001035961.1
	NM_001042497.1	24	5276	NP_001035962.1
	NM_005135.2	25	5146	NP_005126.1
	NM_133647.1	25	5321	NP_598408.1
	XM_006720793.3	24	6056	XP_006720856.1
	AK056019.1	1	527

Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv1052620	Chr.15:32612402 - 34538731 on Build GRCh38	Gain	LOC100131315 MIR1233-1 TMCO5B GREM1 KATNBL1 RYR3 NOP10 GOLGA8A MIR1233-2 EMC4 CHRM5 GOLGA8B SLC12A6 SCG5 NUTM1 PGBD4 FMN1 EMC7 LOC101928134 AVEN ARHGAP11A LOC105370757 LOC101928042 LPCAT4
esv33337	Chr.15:31689863 - 34575097 on Build GRCh38	Gain+Loss	MIR1233-1 GREM1 LOC101060588 RYR3 GOLGA8N GOLGA8A MIR1233-2 EMC4 CHRM5 GOLGA8B SLC12A6 SCG5 NUTM1 PGBD4 FMN1 ULK4P1 LOC105370940 LOC101928042 LPCAT4 LOC100131315 TMCO5B GOLGA8K WHAMMP1 KATNBL1 NOP10 LOC100653133 LOC100996255 CHRNA7 EMC7 LOC101928134 AVEN ARHGAP11A LOC105370757 GOLGA8O
esv3569431	Chr.15:33564570 - 35080307 on Build GRCh38	Gain	MIR1233-1 KATNBL1 RYR3 NOP10 AQR GOLGA8A MIR1233-2 EMC4 LOC101928174 CHRM5 GOLGA8B SLC12A6 NUTM1 PGBD4 ZNF770 ACTC1 EMC7 AVEN GJD2 LPCAT4
dgv4456n54	Chr.15:32604149 - 34557061 on Build GRCh38	Gain	MIR1233-1 GREM1 RYR3 GOLGA8N GOLGA8A MIR1233-2 EMC4 CHRM5 GOLGA8B SLC12A6 SCG5 NUTM1 PGBD4 FMN1 LOC101928042 LPCAT4 LOC100131315 TMCO5B KATNBL1 NOP10 EMC7 LOC101928134 AVEN ARHGAP11A LOC105370757