Genomic Map
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Target Gene Details
Entrez Gene ID: | 100287722 |
Gene Name: | AP4B1 antisense RNA 1 |
Gene Aliases: |
- |
Location: |
Chr.1:113812612-113901237 on Build GRCh38 |
Assay Gene Location: | Within Exon 2 |
| Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
|---|---|---|---|---|
| AP4B1-AS1 | NR_125965.1 | 2 | 273 | |
| DB028504.1 | 2 | 318 | ||
| DB074478.1 | 2 | 232 | ||
| HY043352.1 | 2 | 273 |
Target Gene Details
Entrez Gene ID: | 26191 |
Gene Name: | protein tyrosine phosphatase, non-receptor type 22 |
Gene Aliases: |
LYP, LYP1, LYP2, PEP, PTPN8 |
Location: |
Chr.1:113813811-113871761 on Build GRCh38 |
Assay Gene Location: | Within Exon 24 |
| Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
|---|---|---|---|---|
| PTPN22 | NM_001193431.2 | 21 | 2936 | NP_001180360.1 |
| NM_001308297.1 | 20 | 2948 | NP_001295226.1 | |
| NM_012411.5 | 19 | 2855 | NP_036543.4 | |
| NM_015967.6 | 21 | 3020 | NP_057051.3 | |
| XM_011541221.1 | 20 | 2923 | XP_011539523.1 | |
| XM_011541222.1 | 20 | 2970 | XP_011539524.1 | |
| XM_011541225.2 | 19 | 2919 | XP_011539527.1 | |
| XM_017001005.1 | 21 | 2982 | XP_016856494.1 | |
| AF001846.1 | 21 | 2928 | AAD00904.1 | |
| BC017785.1 | 8 | 1160 | AAH17785.1 | |
| BC071670.1 | 19 | 2794 | AAH71670.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
| Target Variation |
Location | CNV Subtype |
Genes |
|---|---|---|---|
| esv3587240 | Chr.1:113533246 - 114158910 on Build GRCh38 | Loss |
 DCLRE1B
PTPN22
BCL2L15
SYT6
HIPK1-AS1
PHTF1
HIPK1
OLFML3
AP4B1
AP4B1-AS1
MAGI3
RSBN1
|
| esv3587239 | Chr.1:113510852 - 113866662 on Build GRCh38 | Loss |
PTPN22
PHTF1
AP4B1-AS1
MAGI3
RSBN1
|
| nsv831093 | Chr.1:113711545 - 113835613 on Build GRCh38 | Loss |
PTPN22
PHTF1
AP4B1-AS1
RSBN1
|
| esv23869 | Chr.1:113320330 - 114358495 on Build GRCh38 | Loss |
DCLRE1B
PTPN22
BCL2L15
SYT6
HIPK1-AS1
PHTF1
HIPK1
OLFML3
AP4B1
AP4B1-AS1
MAGI3
RSBN1
|
Back To TopMore Information
Set Membership: |
Intragenic
Exonic
DGV Variation
|
Gene Ontology Categories:
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