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See other SLC25A22 CNV Assays ›
Gene Symbol
SLC25A22
Assay Reference Genome
Location

Chr.11:796077 on build GRCh38
Cytoband
11p15.5
Assay ID Hs00125551_cn
Size
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Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 79751

Gene Name:

 solute carrier family 25 member 22

Gene Aliases:

 EIEE3, GC-1, GC1, NET44

Location:

 Chr.11:790475-798269 on Build GRCh38

Assay Gene Location:

 Overlaps Intron 3 - Exon 3
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
SLC25A22 NM_001191060.1 NP_001177989.1
NM_001191061.1 NP_001177990.1
NM_024698.5 NP_078974.1
XM_011520370.1 XP_011518672.1
XM_011520371.1 XP_011518673.1
AK290481.1
AK311038.1
BC019033.2 AAH19033.1
BC023545.2 AAH23545.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv552871 Chr.11:766479 - 870446 on Build GRCh38 Loss PANO1 SLC25A22 PIDD1 CD151 CRACR2B LOC171391 CEND1 RPLP2 POLR2L SNORA52 TSPAN4 PDDC1 CHID1 PNPLA2
nsv469923 Chr.11:378188 - 1302334 on Build GRCh38 Loss LOC101059906 PTDSS2 LMNTD2 CRACR2B EPS8L2 LOC171391 DEAF1 SCT MIR6744 DRD4 RPLP2 MUC5AC B4GALNT4 PHRF1 SNORA52 TSPAN4 PDDC1 LOC143666 TALDO1 MUC2 AP2A2 LOC101927503 PANO1 RNH1 SLC25A22 LRRC56 PKP3 TMEM80 PIDD1 RASSF7 MUC5B CD151 HRAS CEND1 CDHR5 ANO9 POLR2L IRF7 CHID1 MIR210HG PNPLA2 MIR210 MUC6 TOLLIP SIGIRR
dgv1013n100 Chr.11:772982 - 933569 on Build GRCh38 Gain AP2A2 PANO1 SLC25A22 PIDD1 CD151 CRACR2B LOC171391 CEND1 RPLP2 POLR2L SNORA52 TSPAN4 PDDC1 CHID1 PNPLA2
esv2759794 Chr.11:409846 - 1336162 on Build GRCh38 Loss LOC101059906 PTDSS2 LMNTD2 CRACR2B EPS8L2 LOC171391 DEAF1 SCT MIR6744 DRD4 RPLP2 TOLLIP-AS1 MUC5AC PHRF1 SNORA52 TSPAN4 PDDC1 LOC143666 TALDO1 MUC2 AP2A2 LOC101927503 PANO1 RNH1 SLC25A22 LRRC56 TMEM80 PIDD1 RASSF7 MUC5B CD151 HRAS CEND1 CDHR5 ANO9 POLR2L IRF7 CHID1 MIR210HG PNPLA2 MIR210 MUC6 TOLLIP SIGIRR
dgv182e199 Chr.11:349830 - 943372 on Build GRCh38 Deletion LOC101059906 PTDSS2 LMNTD2 CRACR2B EPS8L2 LOC171391 DEAF1 SCT DRD4 RPLP2 B4GALNT4 PHRF1 SNORA52 TSPAN4 PDDC1 LOC143666 TALDO1 AP2A2 PANO1 RNH1 SLC25A22 LRRC56 PKP3 TMEM80 PIDD1 RASSF7 CD151 HRAS CEND1 CDHR5 ANO9 POLR2L IRF7 CHID1 MIR210HG PNPLA2 MIR210 SIGIRR
nsv552870 Chr.11:743813 - 810882 on Build GRCh38 Loss PANO1 RPLP2 SLC25A22 PIDD1 PDDC1 LOC171391 TALDO1 CEND1
nsv1040044 Chr.11:776335 - 900929 on Build GRCh38 Gain+Loss PANO1 SLC25A22 PIDD1 CD151 CRACR2B LOC171391 CEND1 RPLP2 POLR2L SNORA52 TSPAN4 PDDC1 CHID1 PNPLA2
nsv8759 Chr.11:775539 - 835248 on Build GRCh38 Gain PANO1 RPLP2 SLC25A22 PIDD1 SNORA52 PDDC1 CD151 CRACR2B PNPLA2 LOC171391 CEND1
nsv1159791 Chr.11:461793 - 909492 on Build GRCh38 Deletion LOC101059906 PTDSS2 LMNTD2 CRACR2B EPS8L2 LOC171391 DEAF1 SCT DRD4 RPLP2 PHRF1 SNORA52 TSPAN4 PDDC1 LOC143666 TALDO1 PANO1 RNH1 SLC25A22 LRRC56 TMEM80 PIDD1 RASSF7 CD151 HRAS CEND1 CDHR5 POLR2L IRF7 CHID1 MIR210HG PNPLA2 MIR210
nsv951272 Chr.11:751201 - 911500 on Build GRCh38 Deletion PANO1 SLC25A22 PIDD1 CD151 CRACR2B LOC171391 CEND1 RPLP2 POLR2L SNORA52 TSPAN4 PDDC1 CHID1 PNPLA2 TALDO1

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More Information


Additional Information:

For this assay, SNP(s) [rs111520133] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Set Membership:

 Intragenic Non-exonic DGV Variation

Panther Classification:

Gene Ontology Categories:

Function(s) Process(es)


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