Name: [Hs00131038_cn] [SLC12A6]
Creator: Thermo Fisher Scientific
Keywords: [SLC12A6] Assay, [solute carrier family 12 member 6] Assay

Genomic Map

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Assay Details

Entrez Gene ID:	9990
Gene Name:	solute carrier family 12 member 6
Gene Aliases:	ACCPN, KCC3, KCC3A, KCC3B
Location:	Chr.15:34229996-34338064 on Build GRCh38
Assay Gene Location:	Within Exon 27

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
SLC12A6	NM_001042494.1	26	4547	NP_001035959.1
	NM_001042495.1	26	4222	NP_001035960.1
	NM_001042496.1	26	4613	NP_001035961.1
	NM_001042497.1	24	4316	NP_001035962.1
	NM_005135.2	25	4186	NP_005126.1
	NM_133647.1	25	4361	NP_598408.1
	XM_006720793.3	24	5096	XP_006720856.1

Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv1052620	Chr.15:32612402 - 34538731 on Build GRCh38	Gain	SCG5 LOC101928134 TMCO5B KATNBL1 LOC101928042 AVEN MIR1233-2 EMC4 PGBD4 CHRM5 MIR1233-1 ARHGAP11A NUTM1 LOC100131315 FMN1 EMC7 GREM1 GOLGA8B GOLGA8A NOP10 RYR3 LPCAT4 LOC105370757 SLC12A6
esv33337	Chr.15:31689863 - 34575097 on Build GRCh38	Gain+Loss	SCG5 LOC101928134 GOLGA8K KATNBL1 LOC101928042 MIR1233-2 EMC4 LOC100996255 NUTM1 LOC100131315 GOLGA8B RYR3 SLC12A6 ULK4P1 TMCO5B WHAMMP1 AVEN GOLGA8N PGBD4 LOC105370940 CHRM5 MIR1233-1 ARHGAP11A GOLGA8O LOC101060588 FMN1 EMC7 GREM1 LOC100653133 GOLGA8A NOP10 CHRNA7 LPCAT4 LOC105370757
esv3569431	Chr.15:33564570 - 35080307 on Build GRCh38	Gain	KATNBL1 AVEN MIR1233-2 EMC4 PGBD4 CHRM5 MIR1233-1 ACTC1 NUTM1 LOC101928174 EMC7 AQR GOLGA8B GOLGA8A NOP10 RYR3 ZNF770 LPCAT4 GJD2 SLC12A6
dgv4456n54	Chr.15:32604149 - 34557061 on Build GRCh38	Gain	SCG5 LOC101928134 KATNBL1 LOC101928042 MIR1233-2 EMC4 NUTM1 LOC100131315 GOLGA8B RYR3 SLC12A6 TMCO5B AVEN GOLGA8N PGBD4 CHRM5 MIR1233-1 ARHGAP11A FMN1 EMC7 GREM1 GOLGA8A NOP10 LPCAT4 LOC105370757