Hs00132437_cn

• Gene Symbol: AGPAT2
• Assay Reference Genome Location: Chr.9:136673293 on build GRCh38
• Cytoband: 9q34.3

Target Gene Details

• Entrez Gene ID: 10555
• Gene Name: 1-acylglycerol-3-phosphate O-acyltransferase 2
• Gene Aliases: 1-AGPAT2, BSCL, BSCL1, LPAAB, LPAAT-beta
• Location: Chr.9:136673143-136687459 on Build GRCh38
• Assay Gene Location: Within Exon 6

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
AGPAT2	NM_001012727.1	5	1302	NP_001012745.1
	NM_006412.3	6	1398	NP_006403.2
	AF000237.1	6	1362	AAC51649.1
	AF011374.1	6	1356	AAB64299.1
	BC000026.2	6	1341	AAH00026.1
	BC004529.2	5	1236	AAH04529.1
	BC007269.1	4	973	AAH07269.1
	BC019292.1	6	1350	AAH19292.1
	U56418.2			AAB58776.2

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
esv32979	Chr.9:136666564 - 136674090 on Build GRCh38	Gain	MIR126 AGPAT2 EGFL7
dgv13005n54	Chr.9:136605258 - 136696482 on Build GRCh38	Loss	LINC01451 MIR126 HSPC324 AGPAT2 EGFL7
nsv509334	Chr.9:136514168 - 136724663 on Build GRCh38	Insertion	SNHG7 LINC01451 MIR126 MIR4674 NOTCH1 HSPC324 NALT1 AGPAT2 MIR4673 FAM69B EGFL7
nsv951203	Chr.9:136562849 - 136770848 on Build GRCh38	Deletion	MIR126 LOC100128593 SNORA17A MIR6722 HSPC324 EGFL7 SNHG7 LINC01451 LCN8 LCN10 LCN15 SNORA17B AGPAT2 FAM69B LCN6
esv3545642	Chr.9:136672575 - 136673284 on Build GRCh38	Deletion	AGPAT2 EGFL7
nsv469918	Chr.9:136359865 - 137173890 on Build GRCh38	Loss	PHPT1 LOC100128593 SNORA17A MIR6722 INPP5E UAP1L1 SNHG7 MAN1B1 C9orf139 SEC16A TMEM210 CARD9 DPP7 C9orf142 LCN6 CCDC183 MIR126 PTGDS ABCA2 CCDC183-AS1 SDCCAG3 C9orf163 NALT1 MIR4479 LCN8 FUT7 GRIN1 NPDC1 C9orf172 FBXW5 LOC101930307 SNAPC4 TMEM141 PRR31 MIR4673 EGFL7 LCNL1 CLIC3 MIR4674 C8G TRAF2 FAM69B MAN1B1-AS1 MIR4292 DNLZ HSPC324 LCN12 LINC01451 LCN10 MAMDC4 LCN15 NOTCH1 ENTPD2 SNORA17B LRRC26 RABL6 SAPCD2 AGPAT2 EDF1 MIR3621 PMPCA
esv2759720	Chr.9:136356377 - 136932033 on Build GRCh38	Loss	PHPT1 LOC100128593 SNORA17A SNAPC4 TMEM141 MIR6722 INPP5E MIR4673 EGFL7 GPSM1 SNHG7 MIR4674 SEC16A CARD9 TRAF2 FAM69B LCN6 CCDC183 MIR126 MIR4292 DNLZ CCDC183-AS1 SDCCAG3 C9orf163 HSPC324 NALT1 MIR4479 LINC01451 LCN8 LCN10 MAMDC4 LCN15 NOTCH1 SNORA17B RABL6 AGPAT2 EDF1 C9orf172 PMPCA
nsv8579	Chr.9:136505432 - 136760256 on Build GRCh38	Gain	MIR126 LOC100128593 SNORA17A MIR6722 HSPC324 NALT1 MIR4673 EGFL7 SNHG7 LINC01451 LCN8 LCN10 MIR4674 LCN15 NOTCH1 SNORA17B AGPAT2 FAM69B LCN6
dgv955n27	Chr.9:136583078 - 136676165 on Build GRCh38	Loss	LINC01451 MIR126 HSPC324 AGPAT2 EGFL7
nsv1053781	Chr.9:136590694 - 136722927 on Build GRCh38	Gain	LINC01451 MIR126 HSPC324 AGPAT2 FAM69B EGFL7
dgv957n27	Chr.9:136619086 - 136725859 on Build GRCh38	Loss	SNHG7 MIR126 HSPC324 AGPAT2 FAM69B EGFL7
esv2422220	Chr.9:136584135 - 137350098 on Build GRCh38	Deletion	PHPT1 LOC100128593 SNORA17A MIR6722 SSNA1 UAP1L1 SNHG7 MAN1B1 C9orf139 STPG3 TMEM210 DPP7 NELFB C9orf142 LCN6 CCDC183 MIR126 PTGDS CYSRT1 RNF208 ABCA2 CCDC183-AS1 MIR4479 SLC34A3 LCN8 FUT7 GRIN1 NPDC1 TUBB4B C9orf172 ANAPC2 FBXW5 RNF224 NRARP LOC101930307 TMEM141 PRR31 EGFL7 LCNL1 NDOR1 CLIC3 TMEM203 C8G C9orf173-AS1 TRAF2 FAM69B MAN1B1-AS1 TOR4A MIR4292 FAM166A HSPC324 TPRN EXD3 LCN12 LINC01451 LCN10 MAMDC4 LCN15 ENTPD2 SNORA17B LRRC26 RABL6 SAPCD2 AGPAT2 EDF1 MIR3621

More Information

• Set Membership: Intragenic, Exonic, DGV Variation

Panther Classification:

Molecular Function -

acyltransferase

Gene Ontology Categories:

Process(es)

positive regulation of cytokine production
positive regulation of cytokine-mediated signaling pathway
phospholipid metabolic process
phosphatidic acid biosynthetic process
epidermis development
CDP-diacylglycerol biosynthetic process
triglyceride biosynthetic process
response to antidepressant

Function(s)

1-acylglycerol-3-phosphate O-acyltransferase activity