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Gene Symbol
SLC12A6
Assay Reference Genome
Location

Chr.15:34237462 on build GRCh38
Cytoband
15q14
Assay ID Hs00134619_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 9990

Gene Name:

 solute carrier family 12 member 6

Gene Aliases:

 ACCPN, KCC3, KCC3A, KCC3B

Location:

 Chr.15:34229996-34338064 on Build GRCh38

Assay Gene Location:

 Within Exon 23
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
SLC12A6 NM_001042494.1 22 3241 NP_001035959.1
NM_001042495.1 22 2916 NP_001035960.1
NM_001042496.1 22 3307 NP_001035961.1
NM_001042497.1 20 3010 NP_001035962.1
NM_005135.2 21 2880 NP_005126.1
NM_133647.1 21 3055 NP_598408.1
XM_006720793.3 20 3790 XP_006720856.1
AF105366.1 21 3055 AAD39742.1
AF108831.1 21 2789 AAD25337.1
AF116242.1 21 2891 AAF24986.1
AF477977.1 22 3248 AAL85335.1
AF531258.1 20 3010 AAQ10026.1
AF531259.1 22 3248 AAQ10027.1
AF531260.1 22 2886 AAQ10028.1
AK128133.1 20 2563
AK292550.1 22 2994
AK315283.1 21 2852
AL117500.1 18 2483 CAB55965.1
BC051744.1 22 3244 AAH51744.1
BC070107.1 22 2911
BC126241.1 21 2788
BC126243.1 21 2788
BX648195.1 21 3927 CAI46042.1
DQ138323.1 22 3306 ABA02873.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv1052620 Chr.15:32612402 - 34538731 on Build GRCh38 Gain CHRM5 RYR3 GREM1 NUTM1 SCG5 GOLGA8A LOC101928042 LOC101928134 LPCAT4 PGBD4 MIR1233-1 FMN1 TMCO5B SLC12A6 ARHGAP11A LOC100131315 EMC7 AVEN NOP10 GOLGA8B EMC4 KATNBL1 MIR1233-2 LOC105370757
esv33337 Chr.15:31689863 - 34575097 on Build GRCh38 Gain+Loss CHRM5 LOC101060588 LOC105370940 RYR3 SCG5 GOLGA8A WHAMMP1 LPCAT4 GOLGA8N MIR1233-1 GOLGA8K TMCO5B EMC7 GOLGA8B EMC4 KATNBL1 MIR1233-2 LOC105370757 ULK4P1 GREM1 LOC100653133 NUTM1 LOC100996255 LOC101928042 LOC101928134 PGBD4 FMN1 CHRNA7 SLC12A6 ARHGAP11A LOC100131315 AVEN GOLGA8O NOP10
esv3569431 Chr.15:33564570 - 35080307 on Build GRCh38 Gain CHRM5 RYR3 NUTM1 GJD2 LOC101928174 GOLGA8A ACTC1 LPCAT4 PGBD4 MIR1233-1 AQR ZNF770 SLC12A6 EMC7 AVEN NOP10 GOLGA8B EMC4 KATNBL1 MIR1233-2
dgv4456n54 Chr.15:32604149 - 34557061 on Build GRCh38 Gain CHRM5 RYR3 SCG5 GOLGA8A LPCAT4 GOLGA8N MIR1233-1 TMCO5B EMC7 GOLGA8B EMC4 KATNBL1 MIR1233-2 LOC105370757 GREM1 NUTM1 LOC101928042 LOC101928134 PGBD4 FMN1 SLC12A6 ARHGAP11A LOC100131315 AVEN NOP10

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