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Gene Symbol
SLC12A6
Assay Reference Genome
Location

Chr.15:34238287 on build GRCh38
Cytoband
15q14
Assay ID Hs00137060_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 9990

Gene Name:

 solute carrier family 12 member 6

Gene Aliases:

 ACCPN, KCC3, KCC3A, KCC3B

Location:

 Chr.15:34229996-34338064 on Build GRCh38

Assay Gene Location:

 Within Exon 22
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
SLC12A6 NM_001042494.1 21 3097 NP_001035959.1
NM_001042495.1 21 2772 NP_001035960.1
NM_001042496.1 21 3163 NP_001035961.1
NM_001042497.1 19 2866 NP_001035962.1
NM_005135.2 20 2736 NP_005126.1
NM_133647.1 20 2911 NP_598408.1
XM_006720793.3 19 3646 XP_006720856.1
AF105366.1 20 2911 AAD39742.1
AF108831.1 20 2645 AAD25337.1
AF116242.1 20 2747 AAF24986.1
AF477977.1 21 3104 AAL85335.1
AF531258.1 19 2866 AAQ10026.1
AF531259.1 21 3104 AAQ10027.1
AF531260.1 21 2742 AAQ10028.1
AK128133.1 19 2419
AK292550.1 21 2850
AK315283.1 20 2708
AL117500.1 17 2339 CAB55965.1
BC051744.1 21 3100 AAH51744.1
BC070107.1 21 2767
BC126241.1 20 2644
BC126243.1 20 2644
BX648195.1 20 3783 CAI46042.1
DQ138323.1 21 3162 ABA02873.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv1052620 Chr.15:32612402 - 34538731 on Build GRCh38 Gain FMN1 LOC105370757 NUTM1 GREM1 AVEN LOC101928134 LOC100131315 EMC7 GOLGA8B EMC4 LOC101928042 NOP10 PGBD4 TMCO5B SCG5 MIR1233-2 GOLGA8A CHRM5 RYR3 KATNBL1 SLC12A6 ARHGAP11A LPCAT4 MIR1233-1
esv33337 Chr.15:31689863 - 34575097 on Build GRCh38 Gain+Loss FMN1 GREM1 LOC101928134 WHAMMP1 EMC7 GOLGA8B GOLGA8N EMC4 NOP10 PGBD4 TMCO5B GOLGA8O MIR1233-2 LOC100653133 GOLGA8A CHRM5 LOC100996255 RYR3 KATNBL1 ARHGAP11A ULK4P1 CHRNA7 LPCAT4 LOC105370757 LOC105370940 NUTM1 AVEN LOC101060588 LOC100131315 LOC101928042 SCG5 SLC12A6 GOLGA8K MIR1233-1
esv3569431 Chr.15:33564570 - 35080307 on Build GRCh38 Gain AQR NUTM1 LOC101928174 AVEN ZNF770 ACTC1 EMC7 GOLGA8B EMC4 NOP10 PGBD4 MIR1233-2 GOLGA8A CHRM5 GJD2 RYR3 KATNBL1 SLC12A6 LPCAT4 MIR1233-1
dgv4456n54 Chr.15:32604149 - 34557061 on Build GRCh38 Gain FMN1 GREM1 LOC101928134 EMC7 GOLGA8B GOLGA8N EMC4 NOP10 PGBD4 TMCO5B MIR1233-2 GOLGA8A CHRM5 RYR3 KATNBL1 ARHGAP11A LPCAT4 LOC105370757 NUTM1 AVEN LOC100131315 LOC101928042 SCG5 SLC12A6 MIR1233-1

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