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See other SLC12A6 CNV Assays ›
Gene Symbol
SLC12A6
Assay Reference Genome
Location

Chr.15:34233284 on build GRCh38
Cytoband
15q14
Assay ID Hs00138467_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 9990

Gene Name:

 solute carrier family 12 member 6

Gene Aliases:

 ACCPN, KCC3, KCC3A, KCC3B

Location:

 Chr.15:34229996-34338064 on Build GRCh38

Assay Gene Location:

 Within Exon 27
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
SLC12A6 NM_001042494.1 26 4400 NP_001035959.1
NM_001042495.1 26 4075 NP_001035960.1
NM_001042496.1 26 4466 NP_001035961.1
NM_001042497.1 24 4169 NP_001035962.1
NM_005135.2 25 4039 NP_005126.1
NM_133647.1 25 4214 NP_598408.1
XM_006720793.3 24 4949 XP_006720856.1
AF105366.1 AAD39742.1
AF477977.1 AAL85335.1
AF531258.1 AAQ10026.1
AF531259.1 AAQ10027.1
AF531260.1 AAQ10028.1
AK128133.1
AL117500.1 CAB55965.1
BC051744.1 AAH51744.1
BC070107.1
BX648195.1 CAI46042.1
DQ138323.1 ABA02873.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv1052620 Chr.15:32612402 - 34538731 on Build GRCh38 Gain SCG5 MIR1233-1 GOLGA8A NUTM1 NOP10 ARHGAP11A LOC101928134 LPCAT4 FMN1 KATNBL1 EMC4 LOC105370757 LOC100131315 TMCO5B GOLGA8B AVEN SLC12A6 EMC7 RYR3 MIR1233-2 PGBD4 LOC101928042 GREM1 CHRM5
esv33337 Chr.15:31689863 - 34575097 on Build GRCh38 Gain+Loss MIR1233-1 LOC105370940 NUTM1 NOP10 LPCAT4 KATNBL1 EMC4 CHRNA7 LOC105370757 TMCO5B GOLGA8B RYR3 LOC101928042 SCG5 GOLGA8A WHAMMP1 ULK4P1 GOLGA8K ARHGAP11A LOC101928134 LOC100653133 FMN1 LOC100131315 GOLGA8N AVEN SLC12A6 LOC101060588 LOC100996255 EMC7 MIR1233-2 PGBD4 GOLGA8O GREM1 CHRM5
esv3569431 Chr.15:33564570 - 35080307 on Build GRCh38 Gain MIR1233-1 GJD2 GOLGA8A NUTM1 NOP10 LPCAT4 KATNBL1 EMC4 GOLGA8B AVEN SLC12A6 ZNF770 ACTC1 LOC101928174 EMC7 RYR3 MIR1233-2 PGBD4 AQR CHRM5
dgv4456n54 Chr.15:32604149 - 34557061 on Build GRCh38 Gain MIR1233-1 NUTM1 NOP10 LPCAT4 KATNBL1 EMC4 LOC105370757 TMCO5B GOLGA8B RYR3 LOC101928042 SCG5 GOLGA8A ARHGAP11A LOC101928134 FMN1 LOC100131315 GOLGA8N AVEN SLC12A6 EMC7 MIR1233-2 PGBD4 GREM1 CHRM5

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