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See other SPATA22 CNV Assays ›
Gene Symbol
SPATA22
Assay Reference Genome
Location

Chr.17:3440298 on build GRCh38
Cytoband
17p13.2
Assay ID Hs00144078_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 84690

Gene Name:

 spermatogenesis associated 22

Gene Aliases:

 NYD-SP20, NYDSP20

Location:

 Chr.17:3440011-3513852 on Build GRCh38

Assay Gene Location:

 Within Exon 10
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
SPATA22 NM_001170695.1 9 1117 NP_001164166.1
NM_001170696.1 8 988 NP_001164167.1
NM_001170697.1 9 1123 NP_001164168.1
NM_001170698.1 9 1138 NP_001164169.1
NM_001170699.1 8 1259 NP_001164170.1
NM_001321336.1 9 1407 NP_001308265.1
NM_001321337.1 9 1455 NP_001308266.1
NM_032598.4 9 1179 NP_115987.2
AF367472.1 9 1071 AAK53408.1
AK057485.1 1 1547
AK295299.1 9 1407
AK301892.1
AY032684.1 8 937 AAK51120.1
AY035867.1 9 1120 AAK61373.1
AY035868.1 9 1179 AAK61374.1
BC029483.1 9 1064 AAH29483.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
esv3892950 Chr.17:3131812 - 3577153 on Build GRCh38 Loss TRPV1 OR1D4 TRPV3 OR1E1 OR1A1 OR3A1 OR1E2 ASPA OR3A2 SPATA22 OR1A2 OR3A3 OR3A4P
nsv1065489 Chr.17:2631416 - 3948349 on Build GRCh38 Gain TRPV1 NCBP3 EMC6 P2RX1 MIR1253 CCDC92B OR1A1 LOC105371592 CLUH P2RX5 OR3A2 ITGAE LOC105371591 OR3A3 ATP2A3 OR3A4P OR1D5 P2RX5-TAX1BP3 OR1D4 CTNS TRPV3 OR1E1 GSG2 MIR6776 SHPK OR3A1 OR1E2 PAFAH1B1 CAMKK1 ASPA SPATA22 OR1G1 OR1A2 LOC101927911 OR1D2 TAX1BP3 RAP1GAP2
nsv574232 Chr.17:3254715 - 3503170 on Build GRCh38 Gain ASPA OR3A2 SPATA22 OR1E1 OR3A3 OR3A4P OR3A1 OR1E2
esv2660206 Chr.17:2679367 - 3519614 on Build GRCh38 Deletion OR1D4 TRPV3 MIR1253 CCDC92B OR1E1 OR1A1 MIR6776 LOC105371592 OR3A1 OR1E2 PAFAH1B1 CLUH ASPA OR3A2 SPATA22 OR1G1 OR1A2 LOC101927911 LOC105371591 OR3A3 OR1D2 OR3A4P RAP1GAP2 OR1D5
nsv1055740 Chr.17:3381841 - 3890153 on Build GRCh38 Gain TRPV1 NCBP3 CTNS TRPV3 EMC6 OR1E1 GSG2 SHPK OR1E2 P2RX5 CAMKK1 ASPA OR3A2 ITGAE SPATA22 OR3A3 TAX1BP3 P2RX5-TAX1BP3
nsv833341 Chr.17:3352243 - 3521390 on Build GRCh38 Loss ASPA OR3A2 TRPV3 SPATA22 OR1E1 OR3A3 OR1E2
nsv574236 Chr.17:3390044 - 3459775 on Build GRCh38 Gain SPATA22 OR1E1 OR3A3 OR1E2
nsv1059413 Chr.17:3365789 - 3453922 on Build GRCh38 Loss OR3A2 SPATA22 OR1E1 OR3A3 OR1E2
nsv1060071 Chr.17:3398474 - 3633472 on Build GRCh38 Loss TRPV1 ASPA TRPV3 SPATA22 OR3A3 SHPK OR1E2

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