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See other SLC9A3R2 CNV Assays ›
Gene Symbol
SLC9A3R2
Assay Reference Genome
Location

Chr.16:2036385 on build GRCh38
Cytoband
16p13.3
Assay ID Hs00154367_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 9351

Gene Name:

 SLC9A3 regulator 2

Gene Aliases:

 E3KARP, NHE3RF2, NHERF-2, NHERF2, OCTS2, SIP-1, SIP1, TKA-1

Location:

 Chr.16:2026868-2039026 on Build GRCh38

Assay Gene Location:

 Overlaps Intron 5 - Exon 6
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
SLC9A3R2 NM_001130012.2 NP_001123484.1
NM_001252073.1 NP_001239002.1
NM_001252075.1 NP_001239004.1
NM_001252076.1 NP_001239005.1
NM_004785.5 NP_004776.3
XM_005255702.4 XP_005255759.1
XM_006720981.1 XP_006721044.1
XM_017023894.1 XP_016879383.1
XM_017023895.1 XP_016879384.1
AF004900.1 AAC63061.1
AF035771.1 AAC52090.1
BC014513.1 AAH14513.2
BC069014.1 AAH69014.1
BC106001.1 AAI06002.1
BQ687174.1
BX377861.2
CB961565.1
DB495688.2
U82108.1 AAB53042.1
Z50150.1 CAA90511.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
esv2422427 Chr.16:10001 - 2723164 on Build GRCh38 Duplication PDIA2 NPW FAM234A LOC105371184 METRN CCNF LOC105371045 C1QTNF8 MPG MIR5587 LOC105371049 CAPN15 SYNGR3 BAIAP3 TBL3 LOC100134368 MIR6767 LOC652276 NARFL HBQ1 RAB11FIP3 RGS11 AMDHD2 HBZ C16orf91 LUC7L RPL23AP5 DECR2 TBC1D24 TMEM204 JMJD8 MIR662 RAB26 C16orf59 TSR3 GFER MIR6859-4 LINC00235 KCTD5 ECI1 TPSB2 MEIOB WFIKKN1 SNHG19 RAB40C LOC729652 FLJ42627 TPSG1 RHBDL1 AXIN1 RNPS1 WDR90 HBA2 FAM173A SSTR5-AS1 NPRL3 LOC101929280 LINC00254 MLST8 WDR24 LOC105371046 SNORA64 MIR3177 ATP6V0C MIR6768 PRR25 PIGQ ERVK13-1 UNKL TSC2 LOC100287175 PGP EME2 MCRIP2 FBXL16 LMF1-AS1 LOC105371047 LOC107987233 MIR3178 SNRNP25 METTL26 NME4 MRPL28 MSRB1 MRPS34 MIR4516 PDPK1 IFT140 CCDC154 CACNA1H IGFALS RPUSD1 MIR3176 GNPTG GNG13 DNASE1L2 PRSS29P STUB1 NOXO1 FAHD1 TPSAB1 WASIR2 MIR940 ABCA17P TRAF7 RPS2 HAGH SNORA78 SNORD60 SNORA10 LOC105371038 RHOT2 TPSD1 ABCA3 UBE2I MIR4717 CHTF18 DDX11L10 ZNF598 SNHG9 SSTR5 RPL3L E4F1 TMEM8A LOC107984876 PRR35 MAPK8IP3 MSLN HN1L SOX8 PRSS27 PTX4 HAGHL POLR3K CCDC78 TELO2 NDUFB10 HBM ARHGDIG MIR3180-5 MIR6511B1 PKD1 LOC106660606 NUBP2 RHBDF1 NTN3 SPSB3 CASKIN1 MIR3677 MIR1225 NHLRC4 RNF151 NTHL1 HBA1 HS3ST6 SLC9A3R2 CEMP1 BRICD5 CLCN7 LMF1 NME3 CRAMP1
nsv471072 Chr.16:1971892 - 2317508 on Build GRCh38 Loss NPW ECI1 E4F1 SNHG19 LOC105371049 MIR4516 RNPS1 SYNGR3 TBL3 DNASE1L2 MIR3180-5 MLST8 MIR6511B1 NOXO1 PKD1 MIR940 LOC106660606 TRAF7 SNORD60 TSC2 CASKIN1 MIR3677 MIR1225 PGP ABCA3 MIR4717 NTHL1 RAB26 SLC9A3R2 BRICD5 GFER ZNF598
dgv4858n54 Chr.16:1955562 - 2038584 on Build GRCh38 Loss SNHG9 NPW RPS2 SNORA78 SNORA10 SYNGR3 RNF151 TBL3 NDUFB10 SLC9A3R2 SNORA64 NOXO1 GFER ZNF598
nsv952901 Chr.16:1888800 - 2135899 on Build GRCh38 Deletion SNHG9 NPW RPS2 SNORA78 RPL3L TSC2 SNORA10 MIR1225 MSRB1 LOC105371049 MIR4516 SYNGR3 RNF151 NTHL1 HS3ST6 TBL3 NDUFB10 SLC9A3R2 MIR6511B1 SNORA64 NOXO1 PKD1 GFER ZNF598
nsv1160329 Chr.16:1961727 - 2128574 on Build GRCh38 Deletion SNHG9 NPW RPS2 SNORA78 TSC2 SNORA10 MIR1225 LOC105371049 SYNGR3 RNF151 NTHL1 TBL3 NDUFB10 SLC9A3R2 MIR6511B1 SNORA64 NOXO1 PKD1 GFER ZNF598
dgv336n27 Chr.16:1965120 - 2038584 on Build GRCh38 Loss SNHG9 NPW SYNGR3 SNORA78 RNF151 TBL3 SLC9A3R2 NOXO1 GFER ZNF598
nsv571189 Chr.16:2004154 - 2037561 on Build GRCh38 Loss NPW SLC9A3R2 ZNF598

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