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See other SLC9A3R2 CNV Assays ›
Gene Symbol
SLC9A3R2
Assay Reference Genome
Location

Chr.16:2036385 on build GRCh38
Cytoband
16p13.3
Assay ID Hs00154367_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 9351

Gene Name:

 SLC9A3 regulator 2

Gene Aliases:

 E3KARP, NHE3RF2, NHERF-2, NHERF2, OCTS2, SIP-1, SIP1, TKA-1

Location:

 Chr.16:2026868-2039026 on Build GRCh38

Assay Gene Location:

 Overlaps Intron 5 - Exon 6
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
SLC9A3R2 NM_001130012.2 NP_001123484.1
NM_001252073.1 NP_001239002.1
NM_001252075.1 NP_001239004.1
NM_001252076.1 NP_001239005.1
NM_004785.5 NP_004776.3
XM_005255702.4 XP_005255759.1
XM_006720981.1 XP_006721044.1
XM_017023894.1 XP_016879383.1
XM_017023895.1 XP_016879384.1
AF004900.1 AAC63061.1
AF035771.1 AAC52090.1
BC014513.1 AAH14513.2
BC069014.1 AAH69014.1
BC106001.1 AAI06002.1
BQ687174.1
BX377861.2
CB961565.1
DB495688.2
U82108.1 AAB53042.1
Z50150.1 CAA90511.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
esv2422427 Chr.16:10001 - 2723164 on Build GRCh38 Duplication ABCA3 SNHG9 HN1L MIR6767 ECI1 E4F1 HS3ST6 NME4 HBA2 RAB11FIP3 FAM173A PDPK1 ATP6V0C CCNF LMF1-AS1 TSR3 NME3 MIR662 CRAMP1 TPSAB1 UBE2I GNG13 LOC105371184 UNKL MIR6511B1 SNORA78 LOC729652 MIR3677 RAB26 WDR90 MIR6768 CEMP1 LOC101929280 RPL23AP5 GNPTG HBZ HBQ1 RPL3L RPS2 POLR3K TSC2 SNHG19 MRPL28 SNORD60 STUB1 MIR4717 SPSB3 BAIAP3 WDR24 IFT140 TPSG1 MSRB1 SOX8 MEIOB PDIA2 MIR3178 CCDC154 LOC652276 MLST8 PRSS29P LOC107984876 MIR6859-4 DNASE1L2 NHLRC4 DECR2 FAM234A RNPS1 CCDC78 LOC105371045 HAGH FBXL16 SSTR5 RAB40C RHBDF1 PRR25 NPRL3 TPSD1 ERVK13-1 NARFL FLJ42627 TMEM204 DDX11L10 LOC107987233 SNORA64 MPG HAGHL PTX4 IGFALS NTN3 MIR1225 SNORA10 MIR940 MIR3177 GFER PGP METRN TMEM8A NDUFB10 LUC7L NPW ABCA17P CACNA1H HBM METTL26 MRPS34 LMF1 LOC105371046 RPUSD1 MCRIP2 RNF151 HBA1 AXIN1 C16orf59 CASKIN1 EME2 MIR4516 BRICD5 TRAF7 LOC106660606 NTHL1 LOC105371049 SNRNP25 SLC9A3R2 CLCN7 SSTR5-AS1 MIR5587 CHTF18 RHOT2 C16orf91 LOC105371047 FAHD1 WFIKKN1 SYNGR3 TPSB2 LOC105371038 WASIR2 PRSS27 LOC100134368 PKD1 ZNF598 LOC100287175 MIR3180-5 ARHGDIG PIGQ RHBDL1 MAPK8IP3 RGS11 LINC00254 AMDHD2 KCTD5 MSLN PRR35 TELO2 NUBP2 C1QTNF8 MIR3176 TBL3 JMJD8 CAPN15 LINC00235 TBC1D24 NOXO1
nsv523037 Chr.16:1971892 - 2083900 on Build GRCh38 Loss NTHL1 ZNF598 TBL3 NPW SLC9A3R2 GFER TSC2 SYNGR3 NOXO1
nsv952901 Chr.16:1888800 - 2135899 on Build GRCh38 Deletion NDUFB10 PKD1 SNHG9 RPL3L MIR6511B1 NTHL1 RPS2 LOC105371049 ZNF598 SNORA64 NPW SNORA78 HS3ST6 SLC9A3R2 TSC2 MIR1225 MSRB1 TBL3 SNORA10 RNF151 GFER SYNGR3 MIR4516 NOXO1
dgv4858n54 Chr.16:1955562 - 2038584 on Build GRCh38 Loss NDUFB10 SNHG9 RPS2 ZNF598 SNORA64 NPW SNORA78 SLC9A3R2 TBL3 SNORA10 RNF151 GFER SYNGR3 NOXO1
nsv1160329 Chr.16:1961727 - 2128574 on Build GRCh38 Deletion NDUFB10 PKD1 SNHG9 MIR6511B1 NTHL1 RPS2 LOC105371049 ZNF598 SNORA64 NPW SNORA78 SLC9A3R2 TSC2 MIR1225 TBL3 SNORA10 RNF151 GFER SYNGR3 NOXO1
dgv336n27 Chr.16:1965120 - 2038584 on Build GRCh38 Loss SNHG9 ZNF598 TBL3 NPW SNORA78 RNF151 SLC9A3R2 GFER SYNGR3 NOXO1
nsv457348 Chr.16:2004154 - 2037561 on Build GRCh38 Loss ZNF598 NPW SLC9A3R2

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