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See other LOC100289580 CNV Assays ›
Gene Symbol
LOC100289580
Assay Reference Genome
Location

Chr.16:88732381 on build GRCh38
Cytoband
16q24.3
Assay ID Hs00177524_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 100289580

Gene Name:

 uncharacterized LOC100289580

Gene Aliases:

 -

Location:

 Chr.16:88731180-88741425 on Build GRCh38

Assay Gene Location:

 Within Intron 1
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
LOC100289580 NR_103774.1
AK294743.1

Target Gene Details

Entrez Gene ID:

 9780

Gene Name:

 piezo type mechanosensitive ion channel component 1

Gene Aliases:

 DHS, FAM38A, LMPH3, Mib

Location:

 Chr.16:88715338-88785220 on Build GRCh38

Assay Gene Location:

 Within Exon 21
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
PIEZO1 NM_001142864.3 21 3201 NP_001136336.2
AB161230.1 10 1652 BAF03565.1
BC150271.1 10 1489
D87071.1 10 1489 BAA13240.1
KC602455.1 21 2945

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv1063024 Chr.16:88707330 - 89238482 on Build GRCh38 Gain LOC101927793 LOC105371409 APRT PIEZO1 SLC22A31 TRAPPC2L MIR4722 CDT1 ZNF778 LINC00304 GALNS CBFA2T3 LOC400558 LOC100289580 LOC100129697 LOC107987238 ACSF3 CDH15 LOC339059 CTU2 PABPN1L
nsv471113 Chr.16:88650665 - 88764428 on Build GRCh38 Loss SNAI3 PIEZO1 SNAI3-AS1 LOC100289580 RNF166 MIR4722 CYBA LOC339059 MVD CTU2
esv998799 Chr.16:88731962 - 88732995 on Build GRCh38 Insertion PIEZO1 LOC100289580
dgv3064n100 Chr.16:88683753 - 88846491 on Build GRCh38 Gain GALNS SNAI3 APRT PIEZO1 SNAI3-AS1 LOC100289580 LOC107987238 RNF166 MIR4722 CDT1 LOC339059 CTU2
nsv517643 Chr.16:88713767 - 88756339 on Build GRCh38 Loss PIEZO1 LOC100289580 MIR4722 LOC339059 CTU2
nsv833327 Chr.16:88667431 - 88757621 on Build GRCh38 Loss SNAI3 PIEZO1 SNAI3-AS1 LOC100289580 RNF166 MIR4722 LOC339059 CTU2
nsv482951 Chr.16:88633593 - 90228345 on Build GRCh38 Loss APRT SPG7 ZNF276 FANCA CDK10 LINC00304 SNAI3 SPIRE2 LOC400558 ACSF3 CDH15 LOC339059 AFG3L1P LOC105371419 LOC101927793 SLC22A31 TRAPPC2L RNF166 GAS8-AS1 CYBA CDT1 LOC107984817 IL17C GALNS FAM157C DPEP1 MC1R CPNE7 SNAI3-AS1 LOC100129697 LOC107987238 GAS8 MVD TUBB3 ANKRD11 CTU2 URAHP LOC105371409 PIEZO1 SPATA33 TUBB8P7 MIR4722 TCF25 SPATA2L LOC105371414 LOC100287036 CENPBD1 VPS9D1 VPS9D1-AS1 DBNDD1 LOC101927817 ZNF778 CHMP1A CBFA2T3 RPL13 LOC100289580 SNORD68 PRDM7 DEF8 PABPN1L
nsv1927 Chr.16:88712585 - 88743583 on Build GRCh38 Insertion PIEZO1 LOC100289580 MIR4722 LOC339059 CTU2
nsv471114 Chr.16:88688461 - 88756339 on Build GRCh38 Gain PIEZO1 LOC100289580 RNF166 MIR4722 LOC339059 CTU2
nsv573673 Chr.16:88721265 - 88735362 on Build GRCh38 Loss PIEZO1 LOC100289580
nsv952070 Chr.16:88257295 - 88780192 on Build GRCh38 Deletion PIEZO1 RNF166 MIR4722 CYBA LOC107984862 ZNF469 IL17C ZC3H18-AS1 MIR5189 SNAI3 SNAI3-AS1 LOC100289580 ZC3H18 ZFPM1 LOC339059 MVD CTU2
nsv1160442 Chr.16:88708161 - 88778524 on Build GRCh38 Deletion PIEZO1 LOC100289580 MIR4722 LOC339059 CTU2
nsv1061256 Chr.16:88711587 - 89013365 on Build GRCh38 Gain LOC101927793 LOC105371409 APRT PIEZO1 TRAPPC2L MIR4722 CDT1 GALNS CBFA2T3 LOC100289580 LOC100129697 LOC107987238 LOC339059 CTU2 PABPN1L

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