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See other SNAP29 CNV Assays ›
Gene Symbol
SNAP29
Assay Reference Genome
Location

Chr.22:20881103 on build GRCh38
Cytoband
22q11.21
Assay ID Hs00184010_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 9342

Gene Name:

 synaptosome associated protein 29

Gene Aliases:

 CEDNIK, SNAP-29

Location:

 Chr.22:20859004-20891214 on Build GRCh38

Assay Gene Location:

 Overlaps Exon 3 - Intron 3
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
SNAP29 NM_004782.3 NP_004773.1
AF115436.1 AAD11436.1
BC009715.1 AAH09715.1
BG773022.1
BT007357.1 AAP36021.1
CR456582.1 CAG30468.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
esv2678175 Chr.22:20691629 - 21284480 on Build GRCh38 Deletion P2RX6P AIFM3 POM121L4P SNAP29 PI4KA TUBA3FP SERPIND1 POM121L8P GGT2 TMEM191A FAM230B CRKL BCRP2 P2RX6 LZTR1 THAP7-AS1 LOC101928891 MIR649 LRRC74B SLC7A4 THAP7
nsv436864 Chr.22:20346736 - 21559130 on Build GRCh38 Insertion AIFM3 RIMBP3B POM121L4P SNAP29 TMEM191C SERPIND1 GGT2 USP41 LOC101927859 P2RX6 KLHL22 RIMBP3C LZTR1 UBE2L3 PI4KAP2 MIR649 SLC7A4 THAP7 MED15 P2RX6P SMPD4P1 PI4KA TUBA3FP POM121L8P LOC100996335 ZNF74 TMEM191A FAM230B CRKL BCRP2 THAP7-AS1 LOC101928891 SCARF2 HIC2 LRRC74B
dgv7994n54 Chr.22:20559470 - 21111491 on Build GRCh38 Gain MED15 P2RX6P AIFM3 SMPD4P1 POM121L4P SNAP29 PI4KA TUBA3FP SERPIND1 TMEM191A CRKL BCRP2 P2RX6 LZTR1 THAP7-AS1 LOC101928891 MIR649 LRRC74B SLC7A4 THAP7
nsv1065617 Chr.22:20705383 - 21111546 on Build GRCh38 Gain P2RX6P AIFM3 SNAP29 PI4KA TUBA3FP SERPIND1 CRKL BCRP2 P2RX6 LZTR1 THAP7-AS1 LOC101928891 MIR649 LRRC74B SLC7A4 THAP7
esv3893441 Chr.22:20733858 - 21135629 on Build GRCh38 Gain+Loss P2RX6P AIFM3 SNAP29 PI4KA TUBA3FP SERPIND1 CRKL BCRP2 P2RX6 LZTR1 THAP7-AS1 LOC101928891 MIR649 LRRC74B SLC7A4 THAP7
nsv834141 Chr.22:20859455 - 21051952 on Build GRCh38 Loss P2RX6P AIFM3 SNAP29 TUBA3FP CRKL P2RX6 LZTR1 THAP7-AS1 LOC101928891 MIR649 LRRC74B SLC7A4 THAP7
nsv834140 Chr.22:20742586 - 20951488 on Build GRCh38 Loss CRKL SNAP29 PI4KA SERPIND1
esv2763693 Chr.22:20581182 - 21111546 on Build GRCh38 Gain MED15 P2RX6P AIFM3 SMPD4P1 POM121L4P SNAP29 PI4KA TUBA3FP SERPIND1 TMEM191A CRKL BCRP2 P2RX6 LZTR1 THAP7-AS1 LOC101928891 MIR649 LRRC74B SLC7A4 THAP7
dgv4483n100 Chr.22:20362634 - 21212930 on Build GRCh38 Gain AIFM3 POM121L4P SNAP29 SERPIND1 GGT2 USP41 P2RX6 KLHL22 LZTR1 MIR649 SLC7A4 THAP7 MED15 P2RX6P SMPD4P1 PI4KA TUBA3FP ZNF74 TMEM191A FAM230B CRKL BCRP2 THAP7-AS1 LOC101928891 SCARF2 LRRC74B
nsv523162 Chr.22:20389246 - 21108064 on Build GRCh38 Loss MED15 P2RX6P AIFM3 SMPD4P1 POM121L4P SNAP29 PI4KA TUBA3FP SERPIND1 ZNF74 USP41 TMEM191A CRKL BCRP2 P2RX6 KLHL22 LZTR1 THAP7-AS1 LOC101928891 SCARF2 MIR649 LRRC74B SLC7A4 THAP7
nsv588305 Chr.22:20721841 - 21108064 on Build GRCh38 Loss P2RX6P AIFM3 SNAP29 PI4KA TUBA3FP SERPIND1 CRKL BCRP2 P2RX6 LZTR1 THAP7-AS1 LOC101928891 MIR649 LRRC74B SLC7A4 THAP7

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More Information


Additional Information:

For this assay, SNP(s) [rs116892729] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Set Membership:

 Intragenic Non-exonic DGV Variation

Panther Classification:

Molecular Function -

SNARE protein

Gene Ontology Categories:

Function(s) Process(es)


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